Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCN1P35523 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.81■□□□□ 0.44
CLCN1P35523 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.81■□□□□ 0.44
CLCN1P35523 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.81■□□□□ 0.44
CLCN1P35523 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCN1P35523 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.81■□□□□ 0.44
CLCN1P35523 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CLCN1P35523 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.81■□□□□ 0.44
CLCN1P35523 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLCN1P35523 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLCN1P35523 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC17.81■□□□□ 0.44
CLCN1P35523 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCN1P35523 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCN1P35523 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.81■□□□□ 0.44
CLCN1P35523 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 MST1P2-201ENST00000457982 2291 ntBASIC17.81■□□□□ 0.44
CLCN1P35523 AC015909.5-201ENST00000624336 2266 ntBASIC17.81■□□□□ 0.44
CLCN1P35523 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CLCN1P35523 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCN1P35523 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLCN1P35523 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.8■□□□□ 0.44
CLCN1P35523 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCN1P35523 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 AL161772.1-201ENST00000610494 4412 ntBASIC17.8■□□□□ 0.44
CLCN1P35523 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCN1P35523 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCN1P35523 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCN1P35523 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CLCN1P35523 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCN1P35523 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCN1P35523 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CLCN1P35523 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLCN1P35523 AC034105.1-201ENST00000563488 319 ntBASIC17.8■□□□□ 0.44
CLCN1P35523 AC145285.3-201ENST00000564603 959 ntBASIC17.8■□□□□ 0.44
CLCN1P35523 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 Z83851.2-201ENST00000609564 659 ntBASIC17.8■□□□□ 0.44
CLCN1P35523 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.8■□□□□ 0.44
CLCN1P35523 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCN1P35523 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 AC152010.1-201ENST00000415779 2006 ntBASIC17.8■□□□□ 0.44
CLCN1P35523 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCN1P35523 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLCN1P35523 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCN1P35523 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CLCN1P35523 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN1P35523 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN1P35523 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CLCN1P35523 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCN1P35523 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN1P35523 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN1P35523 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCN1P35523 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN1P35523 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CLCN1P35523 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN1P35523 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC17.79■□□□□ 0.44
CLCN1P35523 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN1P35523 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCN1P35523 CES1P1-201ENST00000421606 1704 ntBASIC17.79■□□□□ 0.44
CLCN1P35523 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN1P35523 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN1P35523 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
CLCN1P35523 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCN1P35523 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCN1P35523 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.79■□□□□ 0.44
CLCN1P35523 RHOQP3-201ENST00000437982 621 ntBASIC17.79■□□□□ 0.44
CLCN1P35523 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.79■□□□□ 0.44
CLCN1P35523 AL513480.1-201ENST00000451731 511 ntBASIC17.79■□□□□ 0.44
CLCN1P35523 AC079776.4-201ENST00000511039 504 ntBASIC17.79■□□□□ 0.44
CLCN1P35523 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCN1P35523 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms