Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RPA3P35244 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
RPA3P35244 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.83■□□□□ 0.12
RPA3P35244 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.83■□□□□ 0.12
RPA3P35244 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPA3P35244 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.83■□□□□ 0.12
RPA3P35244 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.82■□□□□ 0.12
RPA3P35244 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RPA3P35244 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.82■□□□□ 0.12
RPA3P35244 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.82■□□□□ 0.12
RPA3P35244 KRT18P32-201ENST00000424695 1287 ntBASIC15.82■□□□□ 0.12
RPA3P35244 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 LINC01225-203ENST00000563550 1244 ntBASIC15.82■□□□□ 0.12
RPA3P35244 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
RPA3P35244 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.82■□□□□ 0.12
RPA3P35244 SPTSSB-204ENST00000617024 1292 ntBASIC15.82■□□□□ 0.12
RPA3P35244 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
RPA3P35244 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RPA3P35244 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RPA3P35244 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 AC117489.1-201ENST00000625169 3217 ntBASIC15.82■□□□□ 0.12
RPA3P35244 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
RPA3P35244 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.82■□□□□ 0.12
RPA3P35244 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RPA3P35244 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.82■□□□□ 0.12
RPA3P35244 AC140479.7-201ENST00000636301 2332 ntBASIC15.82■□□□□ 0.12
RPA3P35244 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.82■□□□□ 0.12
RPA3P35244 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPA3P35244 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPA3P35244 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPA3P35244 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPA3P35244 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPA3P35244 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPA3P35244 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
RPA3P35244 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPA3P35244 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPA3P35244 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPA3P35244 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
RPA3P35244 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPA3P35244 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.81■□□□□ 0.12
RPA3P35244 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.81■□□□□ 0.12
RPA3P35244 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPA3P35244 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RPA3P35244 AL627223.1-201ENST00000416693 442 ntBASIC15.81■□□□□ 0.12
RPA3P35244 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.81■□□□□ 0.12
RPA3P35244 AL645939.2-201ENST00000427340 991 ntBASIC15.81■□□□□ 0.12
RPA3P35244 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.81■□□□□ 0.12
RPA3P35244 DNAJB3-202ENST00000449667 1266 ntBASIC15.81■□□□□ 0.12
RPA3P35244 AC098859.1-201ENST00000502915 1238 ntBASIC15.81■□□□□ 0.12
RPA3P35244 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RPA3P35244 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.81■□□□□ 0.12
RPA3P35244 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.81■□□□□ 0.12
RPA3P35244 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RPA3P35244 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RPA3P35244 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.81■□□□□ 0.12
RPA3P35244 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.81■□□□□ 0.12
RPA3P35244 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.81■□□□□ 0.12
RPA3P35244 AC139530.3-201ENST00000620344 690 ntBASIC15.81■□□□□ 0.12
RPA3P35244 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RPA3P35244 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPA3P35244 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPA3P35244 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RPA3P35244 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPA3P35244 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.8■□□□□ 0.12
RPA3P35244 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPA3P35244 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPA3P35244 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
RPA3P35244 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RPA3P35244 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPA3P35244 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPA3P35244 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPA3P35244 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms