Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
CKS2P33552 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CKS2P33552 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CKS2P33552 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.54□□□□□ -0.56
CKS2P33552 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CKS2P33552 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.54□□□□□ -0.56
CKS2P33552 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.54□□□□□ -0.56
CKS2P33552 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.54□□□□□ -0.56
CKS2P33552 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC11.54□□□□□ -0.56
CKS2P33552 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.54□□□□□ -0.56
CKS2P33552 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.54□□□□□ -0.56
CKS2P33552 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.54□□□□□ -0.56
CKS2P33552 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS2P33552 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
CKS2P33552 MIR4321-201ENST00000592276 80 ntBASIC11.54□□□□□ -0.56
CKS2P33552 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CKS2P33552 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CKS2P33552 AC099336.1-202ENST00000602961 463 ntBASIC11.54□□□□□ -0.56
CKS2P33552 AP001269.4-201ENST00000609611 512 ntBASIC11.54□□□□□ -0.56
CKS2P33552 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.54□□□□□ -0.56
CKS2P33552 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 MED25-212ENST00000618715 1467 ntTSL 5 BASIC11.54□□□□□ -0.56
CKS2P33552 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS2P33552 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CKS2P33552 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC11.54□□□□□ -0.56
CKS2P33552 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS2P33552 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS2P33552 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.54□□□□□ -0.56
CKS2P33552 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS2P33552 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS2P33552 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.53□□□□□ -0.56
CKS2P33552 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
CKS2P33552 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
CKS2P33552 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 RCN1P1-201ENST00000400413 996 ntBASIC11.53□□□□□ -0.56
CKS2P33552 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.53□□□□□ -0.56
CKS2P33552 AC132008.2-207ENST00000454517 770 ntBASIC11.53□□□□□ -0.56
CKS2P33552 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.53□□□□□ -0.56
CKS2P33552 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC11.53□□□□□ -0.56
CKS2P33552 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.53□□□□□ -0.56
CKS2P33552 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CKS2P33552 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
CKS2P33552 AP002414.4-201ENST00000589764 1148 ntBASIC11.53□□□□□ -0.56
CKS2P33552 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.53□□□□□ -0.56
CKS2P33552 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms