Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC6A4P31645 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC6A4P31645 AC018665.1-201ENST00000622927 1362 ntBASIC15.92■□□□□ 0.14
SLC6A4P31645 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SLC6A4P31645 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC6A4P31645 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC6A4P31645 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SLC6A4P31645 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
SLC6A4P31645 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 ARSEP1-201ENST00000420443 635 ntBASIC15.92■□□□□ 0.14
SLC6A4P31645 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 ACA64.2-201ENST00000459014 129 ntBASIC15.92■□□□□ 0.14
SLC6A4P31645 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC6A4P31645 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC6A4P31645 AP001889.1-201ENST00000525414 633 ntBASIC15.92■□□□□ 0.14
SLC6A4P31645 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.92■□□□□ 0.14
SLC6A4P31645 AC233724.13-201ENST00000598383 410 ntBASIC15.92■□□□□ 0.14
SLC6A4P31645 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC6A4P31645 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC6A4P31645 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC6A4P31645 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC6A4P31645 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC6A4P31645 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 HYMAI-201ENST00000635591 3347 ntBASIC15.92■□□□□ 0.14
SLC6A4P31645 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC6A4P31645 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC6A4P31645 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC6A4P31645 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SLC6A4P31645 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SLC6A4P31645 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SLC6A4P31645 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC6A4P31645 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC6A4P31645 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SLC6A4P31645 BAATP1-201ENST00000412284 1225 ntBASIC15.91■□□□□ 0.14
SLC6A4P31645 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SLC6A4P31645 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC6A4P31645 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC6A4P31645 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC6A4P31645 GPR53P-205ENST00000457298 1084 ntBASIC15.91■□□□□ 0.14
SLC6A4P31645 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC6A4P31645 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC6A4P31645 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SLC6A4P31645 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC6A4P31645 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.91■□□□□ 0.14
SLC6A4P31645 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC6A4P31645 PTP4A1P2-201ENST00000546033 454 ntBASIC15.91■□□□□ 0.14
SLC6A4P31645 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC6A4P31645 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC6A4P31645 RAB43P1-201ENST00000561790 589 ntBASIC15.91■□□□□ 0.14
SLC6A4P31645 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC6A4P31645 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC6A4P31645 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC6A4P31645 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC6A4P31645 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC6A4P31645 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SLC6A4P31645 AC136621.1-201ENST00000624017 2304 ntBASIC15.91■□□□□ 0.14
SLC6A4P31645 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC6A4P31645 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC6A4P31645 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SLC6A4P31645 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC6A4P31645 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A4P31645 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC6A4P31645 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A4P31645 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC6A4P31645 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 652.9 ms