Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPS1P31327 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPS1P31327 FAM90A2P-201ENST00000511144 1395 ntBASIC21.47■■□□□ 1.03
CPS1P31327 FAM90A25P-201ENST00000528404 1395 ntBASIC21.47■■□□□ 1.03
CPS1P31327 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
CPS1P31327 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC21.47■■□□□ 1.03
CPS1P31327 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC21.47■■□□□ 1.03
CPS1P31327 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPS1P31327 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CPS1P31327 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPS1P31327 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPS1P31327 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPS1P31327 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPS1P31327 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CPS1P31327 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPS1P31327 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC21.47■■□□□ 1.03
CPS1P31327 HLA-K-203ENST00000430151 1046 ntBASIC21.47■■□□□ 1.03
CPS1P31327 DDX39AP1-201ENST00000445147 1181 ntBASIC21.47■■□□□ 1.03
CPS1P31327 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC21.47■■□□□ 1.03
CPS1P31327 AC026410.1-201ENST00000507366 1101 ntBASIC21.47■■□□□ 1.03
CPS1P31327 ALG1L6P-201ENST00000515248 758 ntBASIC21.47■■□□□ 1.03
CPS1P31327 POU5F1P2-201ENST00000521750 823 ntBASIC21.47■■□□□ 1.03
CPS1P31327 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC21.47■■□□□ 1.03
CPS1P31327 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC21.47■■□□□ 1.03
CPS1P31327 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPS1P31327 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC21.47■■□□□ 1.03
CPS1P31327 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPS1P31327 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC21.47■■□□□ 1.03
CPS1P31327 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPS1P31327 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPS1P31327 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC21.47■■□□□ 1.03
CPS1P31327 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPS1P31327 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CPS1P31327 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC21.46■■□□□ 1.03
CPS1P31327 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CPS1P31327 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC21.46■■□□□ 1.03
CPS1P31327 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC21.46■■□□□ 1.03
CPS1P31327 NDUFS6P1-201ENST00000485187 316 ntBASIC21.46■■□□□ 1.03
CPS1P31327 HLA-J-204ENST00000495278 958 ntBASIC21.46■■□□□ 1.03
CPS1P31327 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC21.46■■□□□ 1.03
CPS1P31327 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPS1P31327 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CPS1P31327 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPS1P31327 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPS1P31327 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
CPS1P31327 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPS1P31327 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CPS1P31327 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.46■■□□□ 1.03
CPS1P31327 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPS1P31327 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPS1P31327 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
CPS1P31327 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
CPS1P31327 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CPS1P31327 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPS1P31327 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CPS1P31327 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC21.45■■□□□ 1.02
CPS1P31327 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC21.45■■□□□ 1.02
CPS1P31327 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC21.45■■□□□ 1.02
CPS1P31327 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CPS1P31327 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC21.45■■□□□ 1.02
CPS1P31327 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC21.45■■□□□ 1.02
CPS1P31327 AC138466.3-201ENST00000619983 221 ntBASIC21.45■■□□□ 1.02
CPS1P31327 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPS1P31327 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPS1P31327 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CPS1P31327 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CPS1P31327 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPS1P31327 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPS1P31327 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
CPS1P31327 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC21.45■■□□□ 1.02
CPS1P31327 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPS1P31327 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC21.45■■□□□ 1.02
CPS1P31327 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CPS1P31327 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CPS1P31327 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CPS1P31327 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC21.45■■□□□ 1.02
CPS1P31327 BCAS2P2-201ENST00000425064 674 ntBASIC21.45■■□□□ 1.02
CPS1P31327 VDAC1P1-201ENST00000439229 848 ntBASIC21.45■■□□□ 1.02
CPS1P31327 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC21.45■■□□□ 1.02
CPS1P31327 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC21.45■■□□□ 1.02
CPS1P31327 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC21.45■■□□□ 1.02
CPS1P31327 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC21.45■■□□□ 1.02
CPS1P31327 MEG3_2.1-201ENST00000611456 105 ntBASIC21.45■■□□□ 1.02
CPS1P31327 AL596087.1-201ENST00000400979 1969 ntBASIC21.44■■□□□ 1.02
CPS1P31327 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPS1P31327 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPS1P31327 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC21.44■■□□□ 1.02
CPS1P31327 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC21.44■■□□□ 1.02
CPS1P31327 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CPS1P31327 PGR-209ENST00000617858 2816 ntTSL 5 BASIC21.44■■□□□ 1.02
CPS1P31327 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC21.44■■□□□ 1.02
CPS1P31327 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC21.44■■□□□ 1.02
CPS1P31327 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPS1P31327 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPS1P31327 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPS1P31327 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC21.44■■□□□ 1.02
CPS1P31327 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
CPS1P31327 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC21.44■■□□□ 1.02
CPS1P31327 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPS1P31327 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms