Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.89□□□□□ -0.19
HOXC12P31275 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.89□□□□□ -0.19
HOXC12P31275 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
HOXC12P31275 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HOXC12P31275 AL513523.2-202ENST00000427283 2040 ntBASIC13.89□□□□□ -0.19
HOXC12P31275 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.89□□□□□ -0.19
HOXC12P31275 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
HOXC12P31275 AP003680.1-201ENST00000598970 3660 ntBASIC13.89□□□□□ -0.19
HOXC12P31275 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.89□□□□□ -0.19
HOXC12P31275 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC12P31275 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC12P31275 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC12P31275 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.88□□□□□ -0.19
HOXC12P31275 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC12P31275 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HOXC12P31275 AC069224.1-201ENST00000566372 1715 ntBASIC13.88□□□□□ -0.19
HOXC12P31275 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC12P31275 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HOXC12P31275 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC12P31275 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC12P31275 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.88□□□□□ -0.19
HOXC12P31275 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.88□□□□□ -0.19
HOXC12P31275 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.88□□□□□ -0.19
HOXC12P31275 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC12P31275 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC12P31275 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
HOXC12P31275 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.88□□□□□ -0.19
HOXC12P31275 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.88□□□□□ -0.19
HOXC12P31275 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HOXC12P31275 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
HOXC12P31275 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC12P31275 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HOXC12P31275 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HOXC12P31275 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
HOXC12P31275 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC12P31275 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.87□□□□□ -0.19
HOXC12P31275 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC12P31275 CDC14C-201ENST00000428251 1719 ntBASIC13.87□□□□□ -0.19
HOXC12P31275 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC12P31275 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
HOXC12P31275 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
HOXC12P31275 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.87□□□□□ -0.19
HOXC12P31275 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC12P31275 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.87□□□□□ -0.19
HOXC12P31275 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
HOXC12P31275 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC12P31275 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC12P31275 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC12P31275 HIST3H2BA-201ENST00000436555 524 ntBASIC13.87□□□□□ -0.19
HOXC12P31275 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
HOXC12P31275 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms