Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PTPN6P29350 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.82□□□□□ -0.04
PTPN6P29350 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PTPN6P29350 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.82□□□□□ -0.04
PTPN6P29350 AL353705.2-201ENST00000428243 662 ntBASIC14.82□□□□□ -0.04
PTPN6P29350 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.82□□□□□ -0.04
PTPN6P29350 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.82□□□□□ -0.04
PTPN6P29350 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PTPN6P29350 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.82□□□□□ -0.04
PTPN6P29350 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.82□□□□□ -0.04
PTPN6P29350 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.82□□□□□ -0.04
PTPN6P29350 DUX4L27-201ENST00000554796 1261 ntBASIC14.82□□□□□ -0.04
PTPN6P29350 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.82□□□□□ -0.04
PTPN6P29350 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.82□□□□□ -0.04
PTPN6P29350 AC140878.1-201ENST00000565277 250 ntBASIC14.82□□□□□ -0.04
PTPN6P29350 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.82□□□□□ -0.04
PTPN6P29350 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.82□□□□□ -0.04
PTPN6P29350 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PTPN6P29350 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PTPN6P29350 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PTPN6P29350 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PTPN6P29350 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PTPN6P29350 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
PTPN6P29350 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.82□□□□□ -0.04
PTPN6P29350 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PTPN6P29350 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PTPN6P29350 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.81□□□□□ -0.04
PTPN6P29350 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
PTPN6P29350 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PTPN6P29350 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.81□□□□□ -0.04
PTPN6P29350 AC007191.1-201ENST00000623179 2995 ntBASIC14.81□□□□□ -0.04
PTPN6P29350 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PTPN6P29350 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
PTPN6P29350 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.81□□□□□ -0.04
PTPN6P29350 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.81□□□□□ -0.04
PTPN6P29350 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.81□□□□□ -0.04
PTPN6P29350 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PTPN6P29350 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PTPN6P29350 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.81□□□□□ -0.04
PTPN6P29350 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PTPN6P29350 SPDYE17-201ENST00000412399 783 ntBASIC14.81□□□□□ -0.04
PTPN6P29350 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.81□□□□□ -0.04
PTPN6P29350 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.81□□□□□ -0.04
PTPN6P29350 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.81□□□□□ -0.04
PTPN6P29350 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.81□□□□□ -0.04
PTPN6P29350 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.81□□□□□ -0.04
PTPN6P29350 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
PTPN6P29350 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.81□□□□□ -0.04
PTPN6P29350 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.81□□□□□ -0.04
PTPN6P29350 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.81□□□□□ -0.04
PTPN6P29350 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PTPN6P29350 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms