Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.28■□□□□ 0.04
BCKDHBP21953 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
BCKDHBP21953 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.28■□□□□ 0.04
BCKDHBP21953 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
BCKDHBP21953 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BCKDHBP21953 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHBP21953 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.27■□□□□ 0.04
BCKDHBP21953 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHBP21953 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHBP21953 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
BCKDHBP21953 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHBP21953 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHBP21953 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHBP21953 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
BCKDHBP21953 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.27■□□□□ 0.04
BCKDHBP21953 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.27■□□□□ 0.04
BCKDHBP21953 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.27■□□□□ 0.04
BCKDHBP21953 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHBP21953 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHBP21953 AL139094.1-201ENST00000405549 1188 ntBASIC15.27■□□□□ 0.04
BCKDHBP21953 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.27■□□□□ 0.04
BCKDHBP21953 MPRIPP1-201ENST00000452433 1089 ntBASIC15.27■□□□□ 0.04
BCKDHBP21953 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHBP21953 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.27■□□□□ 0.04
BCKDHBP21953 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.27■□□□□ 0.04
BCKDHBP21953 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHBP21953 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
BCKDHBP21953 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.27■□□□□ 0.04
BCKDHBP21953 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.27■□□□□ 0.04
BCKDHBP21953 MIR4706-201ENST00000582134 82 ntBASIC15.27■□□□□ 0.04
BCKDHBP21953 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.27■□□□□ 0.04
BCKDHBP21953 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.27■□□□□ 0.04
BCKDHBP21953 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
BCKDHBP21953 AC138649.2-201ENST00000615886 705 ntBASIC15.27■□□□□ 0.04
BCKDHBP21953 AC091812.3-201ENST00000621362 345 ntBASIC15.27■□□□□ 0.04
BCKDHBP21953 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.27■□□□□ 0.04
BCKDHBP21953 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BCKDHBP21953 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.27■□□□□ 0.03
BCKDHBP21953 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.27■□□□□ 0.03
BCKDHBP21953 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BCKDHBP21953 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BCKDHBP21953 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BCKDHBP21953 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.27■□□□□ 0.03
BCKDHBP21953 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BCKDHBP21953 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.26■□□□□ 0.03
BCKDHBP21953 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
BCKDHBP21953 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
BCKDHBP21953 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.26■□□□□ 0.03
BCKDHBP21953 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.26■□□□□ 0.03
BCKDHBP21953 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
BCKDHBP21953 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.26■□□□□ 0.03
BCKDHBP21953 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.26■□□□□ 0.03
BCKDHBP21953 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.26■□□□□ 0.03
BCKDHBP21953 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.26■□□□□ 0.03
BCKDHBP21953 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.26■□□□□ 0.03
BCKDHBP21953 SERPINA13P-202ENST00000478994 924 ntBASIC15.26■□□□□ 0.03
BCKDHBP21953 AC245884.6-201ENST00000515672 1067 ntBASIC15.26■□□□□ 0.03
BCKDHBP21953 AP003171.2-201ENST00000528208 925 ntBASIC15.26■□□□□ 0.03
BCKDHBP21953 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.26■□□□□ 0.03
BCKDHBP21953 OR10B1P-201ENST00000601666 907 ntBASIC15.26■□□□□ 0.03
BCKDHBP21953 AC073413.1-201ENST00000603927 732 ntBASIC15.26■□□□□ 0.03
BCKDHBP21953 AP001505.2-201ENST00000616815 443 ntBASIC15.26■□□□□ 0.03
BCKDHBP21953 MIR6727-201ENST00000620702 65 ntBASIC15.26■□□□□ 0.03
BCKDHBP21953 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.26■□□□□ 0.03
BCKDHBP21953 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
BCKDHBP21953 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
BCKDHBP21953 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
BCKDHBP21953 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.26■□□□□ 0.03
BCKDHBP21953 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
BCKDHBP21953 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BCKDHBP21953 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.26■□□□□ 0.03
BCKDHBP21953 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms