Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MSTO2P-201ENST00000314835 1709 ntBASIC18.08■□□□□ 0.48
ERCC3P19447 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.08■□□□□ 0.48
ERCC3P19447 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC3P19447 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC3P19447 TSPY26P-202ENST00000565928 3884 ntBASIC18.08■□□□□ 0.48
ERCC3P19447 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC3P19447 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.08■□□□□ 0.48
ERCC3P19447 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC3P19447 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ERCC3P19447 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC3P19447 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
ERCC3P19447 AC006449.6-201ENST00000612330 2296 ntBASIC18.07■□□□□ 0.48
ERCC3P19447 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
ERCC3P19447 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC3P19447 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.07■□□□□ 0.48
ERCC3P19447 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC3P19447 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ERCC3P19447 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
ERCC3P19447 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.07■□□□□ 0.48
ERCC3P19447 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
ERCC3P19447 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC3P19447 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.07■□□□□ 0.48
ERCC3P19447 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.07■□□□□ 0.48
ERCC3P19447 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 AL355864.2-201ENST00000447420 863 ntBASIC18.07■□□□□ 0.48
ERCC3P19447 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC3P19447 FO681548.1-201ENST00000455617 1132 ntBASIC18.07■□□□□ 0.48
ERCC3P19447 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.07■□□□□ 0.48
ERCC3P19447 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.07■□□□□ 0.48
ERCC3P19447 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC3P19447 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.07■□□□□ 0.48
ERCC3P19447 AC009486.1-201ENST00000569860 813 ntBASIC18.07■□□□□ 0.48
ERCC3P19447 RN7SL219P-201ENST00000582872 296 ntBASIC18.07■□□□□ 0.48
ERCC3P19447 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
ERCC3P19447 AC097359.3-201ENST00000603982 1210 ntBASIC18.07■□□□□ 0.48
ERCC3P19447 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.07■□□□□ 0.48
ERCC3P19447 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC3P19447 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC3P19447 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC3P19447 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.07■□□□□ 0.48
ERCC3P19447 AC024909.3-201ENST00000611513 2257 ntBASIC18.07■□□□□ 0.48
ERCC3P19447 AL607033.1-201ENST00000623900 1599 ntBASIC18.07■□□□□ 0.48
ERCC3P19447 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ERCC3P19447 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
ERCC3P19447 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC3P19447 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
ERCC3P19447 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ERCC3P19447 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC3P19447 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC3P19447 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.06■□□□□ 0.48
ERCC3P19447 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.06■□□□□ 0.48
ERCC3P19447 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.06■□□□□ 0.48
ERCC3P19447 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 BAATP1-201ENST00000412284 1225 ntBASIC18.06■□□□□ 0.48
ERCC3P19447 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC3P19447 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.06■□□□□ 0.48
ERCC3P19447 AC007551.1-201ENST00000457394 519 ntBASIC18.06■□□□□ 0.48
ERCC3P19447 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC3P19447 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.06■□□□□ 0.48
ERCC3P19447 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.06■□□□□ 0.48
ERCC3P19447 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.06■□□□□ 0.48
ERCC3P19447 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 AC005252.2-201ENST00000624630 1141 ntBASIC18.06■□□□□ 0.48
ERCC3P19447 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC3P19447 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
ERCC3P19447 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC3P19447 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
ERCC3P19447 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC3P19447 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC3P19447 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.05■□□□□ 0.48
ERCC3P19447 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms