Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
SCG2P13521 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCG2P13521 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.89■□□□□ 0.45
SCG2P13521 AC104640.1-201ENST00000562617 2109 ntBASIC17.89■□□□□ 0.45
SCG2P13521 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCG2P13521 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SCG2P13521 AC126365.1-201ENST00000578585 1514 ntBASIC17.89■□□□□ 0.45
SCG2P13521 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.89■□□□□ 0.45
SCG2P13521 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SCG2P13521 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCG2P13521 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCG2P13521 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SCG2P13521 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCG2P13521 VDAC1P7-201ENST00000462417 847 ntBASIC17.89■□□□□ 0.45
SCG2P13521 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.89■□□□□ 0.45
SCG2P13521 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SCG2P13521 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.89■□□□□ 0.45
SCG2P13521 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.89■□□□□ 0.45
SCG2P13521 AC092552.1-201ENST00000547243 906 ntBASIC17.89■□□□□ 0.45
SCG2P13521 CR383656.12-201ENST00000549567 513 ntBASIC17.89■□□□□ 0.45
SCG2P13521 TP53TG3HP-202ENST00000569755 579 ntBASIC17.89■□□□□ 0.45
SCG2P13521 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SCG2P13521 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCG2P13521 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCG2P13521 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.89■□□□□ 0.45
SCG2P13521 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.89■□□□□ 0.45
SCG2P13521 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.89■□□□□ 0.45
SCG2P13521 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCG2P13521 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCG2P13521 DRD5P1-201ENST00000456605 1438 ntBASIC17.89■□□□□ 0.45
SCG2P13521 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SCG2P13521 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.88■□□□□ 0.45
SCG2P13521 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.88■□□□□ 0.45
SCG2P13521 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SCG2P13521 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.88■□□□□ 0.45
SCG2P13521 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.88■□□□□ 0.45
SCG2P13521 RN7SL692P-201ENST00000464677 288 ntBASIC17.88■□□□□ 0.45
SCG2P13521 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.88■□□□□ 0.45
SCG2P13521 ELK1P1-201ENST00000485699 580 ntBASIC17.88■□□□□ 0.45
SCG2P13521 AC026410.3-201ENST00000514280 936 ntBASIC17.88■□□□□ 0.45
SCG2P13521 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.88■□□□□ 0.45
SCG2P13521 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SCG2P13521 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.88■□□□□ 0.45
SCG2P13521 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.88■□□□□ 0.45
SCG2P13521 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.88■□□□□ 0.45
SCG2P13521 AL596325.1-201ENST00000563991 1082 ntBASIC17.88■□□□□ 0.45
SCG2P13521 WASH4P-201ENST00000564273 1246 ntBASIC17.88■□□□□ 0.45
SCG2P13521 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.88■□□□□ 0.45
SCG2P13521 TMEM261P1-201ENST00000604899 340 ntBASIC17.88■□□□□ 0.45
SCG2P13521 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.88■□□□□ 0.45
SCG2P13521 AL645728.2-202ENST00000641679 227 ntBASIC17.88■□□□□ 0.45
SCG2P13521 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SCG2P13521 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SCG2P13521 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SCG2P13521 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCG2P13521 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCG2P13521 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCG2P13521 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
SCG2P13521 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SCG2P13521 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
SCG2P13521 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCG2P13521 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SCG2P13521 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.87■□□□□ 0.45
SCG2P13521 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
SCG2P13521 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SCG2P13521 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCG2P13521 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.87■□□□□ 0.45
SCG2P13521 AC148477.4-201ENST00000613430 1793 ntBASIC17.87■□□□□ 0.45
SCG2P13521 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
SCG2P13521 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.87■□□□□ 0.45
SCG2P13521 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
SCG2P13521 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCG2P13521 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCG2P13521 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.87■□□□□ 0.45
SCG2P13521 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCG2P13521 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCG2P13521 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.87■□□□□ 0.45
SCG2P13521 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms