Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CYP3A4P08684 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CYP3A4P08684 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CYP3A4P08684 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CYP3A4P08684 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CYP3A4P08684 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CYP3A4P08684 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CYP3A4P08684 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CYP3A4P08684 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 AC148477.4-201ENST00000613430 1793 ntBASIC17.39■□□□□ 0.37
CYP3A4P08684 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 OR8S1-201ENST00000310194 1080 ntBASIC17.39■□□□□ 0.37
CYP3A4P08684 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.39■□□□□ 0.37
CYP3A4P08684 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CYP3A4P08684 AL355864.2-201ENST00000447420 863 ntBASIC17.39■□□□□ 0.37
CYP3A4P08684 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 KRT18P25-201ENST00000508931 1278 ntBASIC17.39■□□□□ 0.37
CYP3A4P08684 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.39■□□□□ 0.37
CYP3A4P08684 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.39■□□□□ 0.37
CYP3A4P08684 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 GNRHR2-203ENST00000581100 1187 ntBASIC17.39■□□□□ 0.37
CYP3A4P08684 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CYP3A4P08684 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CYP3A4P08684 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.39■□□□□ 0.37
CYP3A4P08684 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CYP3A4P08684 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.39■□□□□ 0.37
CYP3A4P08684 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.39■□□□□ 0.37
CYP3A4P08684 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CYP3A4P08684 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 KRT8P14-201ENST00000414254 1442 ntBASIC17.38■□□□□ 0.37
CYP3A4P08684 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.38■□□□□ 0.37
CYP3A4P08684 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CYP3A4P08684 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.38■□□□□ 0.37
CYP3A4P08684 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.38■□□□□ 0.37
CYP3A4P08684 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CYP3A4P08684 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
CYP3A4P08684 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.38■□□□□ 0.37
CYP3A4P08684 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CYP3A4P08684 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.38■□□□□ 0.37
CYP3A4P08684 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.38■□□□□ 0.37
CYP3A4P08684 BCRP2-202ENST00000447763 634 ntBASIC17.38■□□□□ 0.37
CYP3A4P08684 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.38■□□□□ 0.37
CYP3A4P08684 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.38■□□□□ 0.37
CYP3A4P08684 GPR53P-205ENST00000457298 1084 ntBASIC17.38■□□□□ 0.37
CYP3A4P08684 ACA64.2-201ENST00000459014 129 ntBASIC17.38■□□□□ 0.37
CYP3A4P08684 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.38■□□□□ 0.37
CYP3A4P08684 AC106760.1-201ENST00000508690 800 ntBASIC17.38■□□□□ 0.37
CYP3A4P08684 BCRP6-201ENST00000510112 632 ntBASIC17.38■□□□□ 0.37
CYP3A4P08684 BCRP7-201ENST00000511549 544 ntBASIC17.38■□□□□ 0.37
CYP3A4P08684 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CYP3A4P08684 RAB43P1-201ENST00000561790 589 ntBASIC17.38■□□□□ 0.37
CYP3A4P08684 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.38■□□□□ 0.37
CYP3A4P08684 AL512343.1-201ENST00000605837 169 ntBASIC17.38■□□□□ 0.37
CYP3A4P08684 KRT8P35-201ENST00000483942 1338 ntBASIC17.38■□□□□ 0.37
CYP3A4P08684 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.38■□□□□ 0.37
CYP3A4P08684 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.38■□□□□ 0.37
CYP3A4P08684 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CYP3A4P08684 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.38■□□□□ 0.37
CYP3A4P08684 PPT1-215ENST00000641471 2368 ntBASIC17.38■□□□□ 0.37
CYP3A4P08684 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.38■□□□□ 0.37
CYP3A4P08684 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CYP3A4P08684 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CYP3A4P08684 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CYP3A4P08684 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.37■□□□□ 0.37
CYP3A4P08684 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CYP3A4P08684 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms