Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.72■□□□□ 0.11
RETP07949 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RETP07949 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RETP07949 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.72■□□□□ 0.11
RETP07949 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RETP07949 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RETP07949 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.72■□□□□ 0.11
RETP07949 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RETP07949 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RETP07949 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RETP07949 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RETP07949 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RETP07949 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
RETP07949 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RETP07949 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RETP07949 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RETP07949 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RETP07949 BTBD6P1-201ENST00000412176 1267 ntBASIC15.72■□□□□ 0.11
RETP07949 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.72■□□□□ 0.11
RETP07949 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RETP07949 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.72■□□□□ 0.11
RETP07949 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.72■□□□□ 0.11
RETP07949 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.72■□□□□ 0.11
RETP07949 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RETP07949 ACTG1P17-201ENST00000558391 1119 ntBASIC15.72■□□□□ 0.11
RETP07949 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RETP07949 MIR4321-201ENST00000592276 80 ntBASIC15.72■□□□□ 0.11
RETP07949 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.72■□□□□ 0.11
RETP07949 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.72■□□□□ 0.11
RETP07949 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RETP07949 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.72■□□□□ 0.11
RETP07949 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.72■□□□□ 0.11
RETP07949 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.72■□□□□ 0.11
RETP07949 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.72■□□□□ 0.11
RETP07949 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.72■□□□□ 0.11
RETP07949 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RETP07949 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
RETP07949 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.72■□□□□ 0.11
RETP07949 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RETP07949 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RETP07949 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.71■□□□□ 0.11
RETP07949 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RETP07949 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RETP07949 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
RETP07949 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.71■□□□□ 0.11
RETP07949 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.71■□□□□ 0.11
RETP07949 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.71■□□□□ 0.11
RETP07949 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 CNN2P8-201ENST00000421872 913 ntBASIC15.71■□□□□ 0.11
RETP07949 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.71■□□□□ 0.11
RETP07949 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.71■□□□□ 0.11
RETP07949 AC004898.1-201ENST00000451057 766 ntBASIC15.71■□□□□ 0.11
RETP07949 UPF3AP2-201ENST00000457924 1132 ntBASIC15.71■□□□□ 0.11
RETP07949 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.71■□□□□ 0.11
RETP07949 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.71■□□□□ 0.11
RETP07949 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.71■□□□□ 0.11
RETP07949 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.71■□□□□ 0.11
RETP07949 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.71■□□□□ 0.11
RETP07949 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.71■□□□□ 0.11
RETP07949 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.71■□□□□ 0.11
RETP07949 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.71■□□□□ 0.11
RETP07949 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.71■□□□□ 0.11
RETP07949 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.71■□□□□ 0.11
RETP07949 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.71■□□□□ 0.11
RETP07949 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.71■□□□□ 0.11
RETP07949 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RETP07949 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RETP07949 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RETP07949 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RETP07949 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.71■□□□□ 0.1
RETP07949 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.71■□□□□ 0.1
RETP07949 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.7■□□□□ 0.1
RETP07949 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RETP07949 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms