Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 AC036164.1-201ENST00000570544 333 ntBASIC15.78■□□□□ 0.12
HLA-DQB2P05538 RN7SL204P-201ENST00000582831 262 ntBASIC15.78■□□□□ 0.12
HLA-DQB2P05538 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQB2P05538 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 AC236430.1-201ENST00000402231 743 ntBASIC15.77■□□□□ 0.12
HLA-DQB2P05538 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 HMGN1P19-201ENST00000436976 333 ntBASIC15.77■□□□□ 0.12
HLA-DQB2P05538 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 AC093004.1-201ENST00000508850 424 ntBASIC15.77■□□□□ 0.12
HLA-DQB2P05538 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 LINC02560-201ENST00000596379 459 ntBASIC15.77■□□□□ 0.12
HLA-DQB2P05538 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQB2P05538 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQB2P05538 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQB2P05538 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.77■□□□□ 0.11
HLA-DQB2P05538 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQB2P05538 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQB2P05538 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms