Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC9.42□□□□□ -0.9
APOBP04114 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC9.42□□□□□ -0.9
APOBP04114 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC9.42□□□□□ -0.9
APOBP04114 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
APOBP04114 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC9.42□□□□□ -0.9
APOBP04114 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC9.42□□□□□ -0.9
APOBP04114 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
APOBP04114 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 AL357373.1-201ENST00000394974 322 ntBASIC9.42□□□□□ -0.9
APOBP04114 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC9.42□□□□□ -0.9
APOBP04114 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC9.42□□□□□ -0.9
APOBP04114 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC9.42□□□□□ -0.9
APOBP04114 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC9.42□□□□□ -0.9
APOBP04114 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC9.42□□□□□ -0.9
APOBP04114 AL132780.4-201ENST00000624870 1135 ntBASIC9.42□□□□□ -0.9
APOBP04114 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
APOBP04114 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC9.42□□□□□ -0.9
APOBP04114 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
APOBP04114 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC9.42□□□□□ -0.9
APOBP04114 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
APOBP04114 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC9.42□□□□□ -0.9
APOBP04114 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC9.42□□□□□ -0.9
APOBP04114 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC9.42□□□□□ -0.9
APOBP04114 LINC00431-202ENST00000636375 159 ntBASIC9.42□□□□□ -0.9
APOBP04114 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
APOBP04114 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
APOBP04114 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
APOBP04114 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC9.42□□□□□ -0.9
APOBP04114 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
APOBP04114 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 UROS-201ENST00000368774 744 ntTSL 2 BASIC9.42□□□□□ -0.9
APOBP04114 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
APOBP04114 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC9.42□□□□□ -0.9
APOBP04114 PSMD4P1-201ENST00000433951 1109 ntBASIC9.42□□□□□ -0.9
APOBP04114 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC9.42□□□□□ -0.9
APOBP04114 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC9.42□□□□□ -0.9
APOBP04114 AC005962.1-201ENST00000584100 773 ntBASIC9.42□□□□□ -0.9
APOBP04114 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC9.42□□□□□ -0.9
APOBP04114 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC9.42□□□□□ -0.9
APOBP04114 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC9.41□□□□□ -0.9
APOBP04114 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 HIST2H2BA-201ENST00000412169 381 ntBASIC9.41□□□□□ -0.9
APOBP04114 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC9.41□□□□□ -0.9
APOBP04114 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC9.41□□□□□ -0.9
APOBP04114 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC9.41□□□□□ -0.9
APOBP04114 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC9.41□□□□□ -0.9
APOBP04114 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC9.41□□□□□ -0.9
APOBP04114 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC9.41□□□□□ -0.9
APOBP04114 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC9.41□□□□□ -0.9
APOBP04114 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
APOBP04114 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
APOBP04114 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC9.41□□□□□ -0.9
APOBP04114 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC9.41□□□□□ -0.9
APOBP04114 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC9.41□□□□□ -0.9
APOBP04114 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
APOBP04114 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC9.41□□□□□ -0.9
APOBP04114 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC9.41□□□□□ -0.9
APOBP04114 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 AL603764.1-201ENST00000636452 321 ntBASIC9.41□□□□□ -0.9
APOBP04114 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC9.41□□□□□ -0.9
APOBP04114 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
APOBP04114 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
APOBP04114 AL137783.1-201ENST00000623494 1896 ntBASIC9.41□□□□□ -0.9
APOBP04114 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 MRPL37P1-201ENST00000592451 1337 ntBASIC9.41□□□□□ -0.9
APOBP04114 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
APOBP04114 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
APOBP04114 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms