Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.99■□□□□ 0.31
VTNP04004 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.99■□□□□ 0.31
VTNP04004 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.99■□□□□ 0.31
VTNP04004 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.99■□□□□ 0.31
VTNP04004 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.99■□□□□ 0.31
VTNP04004 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.99■□□□□ 0.31
VTNP04004 RHOXF1P1-202ENST00000635473 501 ntBASIC16.99■□□□□ 0.31
VTNP04004 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.99■□□□□ 0.31
VTNP04004 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
VTNP04004 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.99■□□□□ 0.31
VTNP04004 HYMAI-201ENST00000635591 3347 ntBASIC16.99■□□□□ 0.31
VTNP04004 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.99■□□□□ 0.31
VTNP04004 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
VTNP04004 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.99■□□□□ 0.31
VTNP04004 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VTNP04004 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.99■□□□□ 0.31
VTNP04004 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
VTNP04004 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.98■□□□□ 0.31
VTNP04004 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.98■□□□□ 0.31
VTNP04004 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 AP005117.1-202ENST00000581724 1908 ntBASIC16.98■□□□□ 0.31
VTNP04004 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.98■□□□□ 0.31
VTNP04004 AC148477.4-201ENST00000613430 1793 ntBASIC16.98■□□□□ 0.31
VTNP04004 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.98■□□□□ 0.31
VTNP04004 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
VTNP04004 KLF2P2-201ENST00000416807 1039 ntBASIC16.98■□□□□ 0.31
VTNP04004 FAM21FP-201ENST00000426241 1131 ntBASIC16.98■□□□□ 0.31
VTNP04004 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.98■□□□□ 0.31
VTNP04004 FAM197Y7-201ENST00000432892 766 ntBASIC16.98■□□□□ 0.31
VTNP04004 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.98■□□□□ 0.31
VTNP04004 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.98■□□□□ 0.31
VTNP04004 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.98■□□□□ 0.31
VTNP04004 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VTNP04004 MIR4538-201ENST00000581377 78 ntBASIC16.98■□□□□ 0.31
VTNP04004 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.98■□□□□ 0.31
VTNP04004 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.98■□□□□ 0.31
VTNP04004 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.98■□□□□ 0.31
VTNP04004 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.98■□□□□ 0.31
VTNP04004 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.98■□□□□ 0.31
VTNP04004 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.98■□□□□ 0.31
VTNP04004 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.98■□□□□ 0.31
VTNP04004 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.98■□□□□ 0.31
VTNP04004 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.98■□□□□ 0.31
VTNP04004 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VTNP04004 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
VTNP04004 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VTNP04004 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VTNP04004 AL138709.1-201ENST00000614840 1693 ntBASIC16.97■□□□□ 0.31
VTNP04004 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
VTNP04004 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
VTNP04004 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.97■□□□□ 0.31
VTNP04004 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
VTNP04004 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.97■□□□□ 0.31
VTNP04004 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
VTNP04004 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 MIR1908-201ENST00000410394 80 ntBASIC16.97■□□□□ 0.31
VTNP04004 CNN2P8-201ENST00000421872 913 ntBASIC16.97■□□□□ 0.31
VTNP04004 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.97■□□□□ 0.31
VTNP04004 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.97■□□□□ 0.31
VTNP04004 RNA5SP412-201ENST00000516234 123 ntBASIC16.97■□□□□ 0.31
VTNP04004 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.97■□□□□ 0.31
VTNP04004 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.97■□□□□ 0.31
VTNP04004 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.97■□□□□ 0.31
VTNP04004 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.97■□□□□ 0.31
VTNP04004 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms