Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL2A1P02458 AL023803.2-201ENST00000620080 638 ntBASIC17.85■□□□□ 0.45
COL2A1P02458 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL2A1P02458 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
COL2A1P02458 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL2A1P02458 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.85■□□□□ 0.45
COL2A1P02458 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL2A1P02458 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.85■□□□□ 0.45
COL2A1P02458 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
COL2A1P02458 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL2A1P02458 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
COL2A1P02458 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.84■□□□□ 0.45
COL2A1P02458 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 AL138725.1-201ENST00000407347 1314 ntBASIC17.84■□□□□ 0.45
COL2A1P02458 FKBP4P6-201ENST00000457486 1332 ntBASIC17.84■□□□□ 0.45
COL2A1P02458 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
COL2A1P02458 RN7SKP230-201ENST00000365642 335 ntBASIC17.84■□□□□ 0.45
COL2A1P02458 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.84■□□□□ 0.45
COL2A1P02458 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.84■□□□□ 0.45
COL2A1P02458 AC022217.1-201ENST00000521069 738 ntBASIC17.84■□□□□ 0.45
COL2A1P02458 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.84■□□□□ 0.45
COL2A1P02458 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.84■□□□□ 0.45
COL2A1P02458 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.84■□□□□ 0.45
COL2A1P02458 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.84■□□□□ 0.45
COL2A1P02458 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 MIR4683-201ENST00000579659 81 ntBASIC17.84■□□□□ 0.45
COL2A1P02458 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.84■□□□□ 0.45
COL2A1P02458 AL021578.1-201ENST00000613646 709 ntBASIC17.84■□□□□ 0.45
COL2A1P02458 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.84■□□□□ 0.45
COL2A1P02458 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COL2A1P02458 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.84■□□□□ 0.45
COL2A1P02458 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
COL2A1P02458 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.84■□□□□ 0.45
COL2A1P02458 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.84■□□□□ 0.45
COL2A1P02458 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.84■□□□□ 0.45
COL2A1P02458 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL2A1P02458 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL2A1P02458 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
COL2A1P02458 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.83■□□□□ 0.45
COL2A1P02458 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL2A1P02458 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL2A1P02458 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL2A1P02458 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
COL2A1P02458 NKAIN1P1-201ENST00000435754 582 ntBASIC17.83■□□□□ 0.45
COL2A1P02458 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.83■□□□□ 0.45
COL2A1P02458 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.83■□□□□ 0.45
COL2A1P02458 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.83■□□□□ 0.45
COL2A1P02458 AL645939.5-201ENST00000606834 243 ntBASIC17.83■□□□□ 0.45
COL2A1P02458 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
COL2A1P02458 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL2A1P02458 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL2A1P02458 AC002472.3-201ENST00000640124 621 ntBASIC17.83■□□□□ 0.45
COL2A1P02458 AC138627.1-207ENST00000641560 1006 ntBASIC17.83■□□□□ 0.45
COL2A1P02458 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL2A1P02458 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL2A1P02458 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL2A1P02458 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
COL2A1P02458 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL2A1P02458 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.83■□□□□ 0.44
COL2A1P02458 AC011840.2-201ENST00000563063 1520 ntBASIC17.83■□□□□ 0.44
COL2A1P02458 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL2A1P02458 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.83■□□□□ 0.44
COL2A1P02458 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL2A1P02458 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL2A1P02458 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.83■□□□□ 0.44
COL2A1P02458 KRT8P29-201ENST00000420409 1371 ntBASIC17.83■□□□□ 0.44
COL2A1P02458 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL2A1P02458 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL2A1P02458 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.83■□□□□ 0.44
COL2A1P02458 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL2A1P02458 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL2A1P02458 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.82■□□□□ 0.44
COL2A1P02458 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL2A1P02458 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL2A1P02458 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL2A1P02458 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL2A1P02458 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.82■□□□□ 0.44
COL2A1P02458 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.82■□□□□ 0.44
COL2A1P02458 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.82■□□□□ 0.44
COL2A1P02458 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms