Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TOP3BO95985 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TOP3BO95985 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.04■□□□□ 0.16
TOP3BO95985 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.04■□□□□ 0.16
TOP3BO95985 KRT223P-202ENST00000449164 1292 ntBASIC16.04■□□□□ 0.16
TOP3BO95985 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.04■□□□□ 0.16
TOP3BO95985 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TOP3BO95985 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TOP3BO95985 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TOP3BO95985 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.04■□□□□ 0.16
TOP3BO95985 AC007431.3-201ENST00000623221 587 ntBASIC16.04■□□□□ 0.16
TOP3BO95985 AL109936.8-201ENST00000641772 604 ntBASIC16.04■□□□□ 0.16
TOP3BO95985 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TOP3BO95985 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TOP3BO95985 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.04■□□□□ 0.16
TOP3BO95985 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TOP3BO95985 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.04■□□□□ 0.16
TOP3BO95985 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TOP3BO95985 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TOP3BO95985 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.04■□□□□ 0.16
TOP3BO95985 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TOP3BO95985 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TOP3BO95985 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.04■□□□□ 0.16
TOP3BO95985 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.04■□□□□ 0.16
TOP3BO95985 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TOP3BO95985 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TOP3BO95985 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TOP3BO95985 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TOP3BO95985 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.03■□□□□ 0.16
TOP3BO95985 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TOP3BO95985 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.03■□□□□ 0.16
TOP3BO95985 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.03■□□□□ 0.16
TOP3BO95985 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TOP3BO95985 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TOP3BO95985 AC105250.1-201ENST00000509378 2057 ntBASIC16.03■□□□□ 0.16
TOP3BO95985 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TOP3BO95985 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.03■□□□□ 0.16
TOP3BO95985 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.03■□□□□ 0.16
TOP3BO95985 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.03■□□□□ 0.16
TOP3BO95985 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 MTND6P24-201ENST00000440466 518 ntBASIC16.03■□□□□ 0.16
TOP3BO95985 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.03■□□□□ 0.16
TOP3BO95985 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.03■□□□□ 0.16
TOP3BO95985 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.03■□□□□ 0.16
TOP3BO95985 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.03■□□□□ 0.16
TOP3BO95985 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TOP3BO95985 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.03■□□□□ 0.16
TOP3BO95985 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
TOP3BO95985 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.03■□□□□ 0.16
TOP3BO95985 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
TOP3BO95985 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.03■□□□□ 0.16
TOP3BO95985 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOP3BO95985 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.02■□□□□ 0.16
TOP3BO95985 TMBIM7P-203ENST00000641617 1718 ntBASIC16.02■□□□□ 0.16
TOP3BO95985 KRT8P44-201ENST00000441609 1350 ntBASIC16.02■□□□□ 0.16
TOP3BO95985 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.02■□□□□ 0.16
TOP3BO95985 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.02■□□□□ 0.16
TOP3BO95985 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.16
TOP3BO95985 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TOP3BO95985 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.02■□□□□ 0.16
TOP3BO95985 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TOP3BO95985 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TOP3BO95985 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TOP3BO95985 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TOP3BO95985 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
TOP3BO95985 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TOP3BO95985 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TOP3BO95985 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TOP3BO95985 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TOP3BO95985 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.02■□□□□ 0.16
TOP3BO95985 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TOP3BO95985 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.02■□□□□ 0.16
TOP3BO95985 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TOP3BO95985 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.02■□□□□ 0.16
TOP3BO95985 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TOP3BO95985 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TOP3BO95985 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TOP3BO95985 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.02■□□□□ 0.16
TOP3BO95985 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.02■□□□□ 0.16
TOP3BO95985 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.02■□□□□ 0.16
TOP3BO95985 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.02■□□□□ 0.16
TOP3BO95985 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.02■□□□□ 0.16
TOP3BO95985 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.16
TOP3BO95985 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.02■□□□□ 0.16
TOP3BO95985 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms