Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.99■□□□□ 0.47
CTDNEP1O95476 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.99■□□□□ 0.47
CTDNEP1O95476 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CTDNEP1O95476 FGD5P1-202ENST00000614866 2498 ntBASIC17.99■□□□□ 0.47
CTDNEP1O95476 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTDNEP1O95476 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDNEP1O95476 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDNEP1O95476 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.99■□□□□ 0.47
CTDNEP1O95476 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDNEP1O95476 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDNEP1O95476 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDNEP1O95476 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDNEP1O95476 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDNEP1O95476 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDNEP1O95476 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTDNEP1O95476 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CTDNEP1O95476 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CTDNEP1O95476 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTDNEP1O95476 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.98■□□□□ 0.47
CTDNEP1O95476 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTDNEP1O95476 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDNEP1O95476 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.98■□□□□ 0.47
CTDNEP1O95476 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDNEP1O95476 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDNEP1O95476 TSPY26P-202ENST00000565928 3884 ntBASIC17.98■□□□□ 0.47
CTDNEP1O95476 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDNEP1O95476 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTDNEP1O95476 AC093214.1-201ENST00000511688 1107 ntBASIC17.98■□□□□ 0.47
CTDNEP1O95476 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.98■□□□□ 0.47
CTDNEP1O95476 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTDNEP1O95476 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.98■□□□□ 0.47
CTDNEP1O95476 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.98■□□□□ 0.47
CTDNEP1O95476 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.98■□□□□ 0.47
CTDNEP1O95476 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.98■□□□□ 0.47
CTDNEP1O95476 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.98■□□□□ 0.47
CTDNEP1O95476 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.98■□□□□ 0.47
CTDNEP1O95476 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.98■□□□□ 0.47
CTDNEP1O95476 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDNEP1O95476 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CTDNEP1O95476 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTDNEP1O95476 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDNEP1O95476 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTDNEP1O95476 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.98■□□□□ 0.47
CTDNEP1O95476 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.98■□□□□ 0.47
CTDNEP1O95476 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.98■□□□□ 0.47
CTDNEP1O95476 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTDNEP1O95476 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTDNEP1O95476 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTDNEP1O95476 LINC01101-201ENST00000622953 1884 ntBASIC17.97■□□□□ 0.47
CTDNEP1O95476 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTDNEP1O95476 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTDNEP1O95476 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTDNEP1O95476 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 GNAQP1-201ENST00000444815 1067 ntBASIC17.97■□□□□ 0.47
CTDNEP1O95476 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 AC011467.4-201ENST00000594891 528 ntBASIC17.97■□□□□ 0.47
CTDNEP1O95476 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTDNEP1O95476 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTDNEP1O95476 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTDNEP1O95476 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTDNEP1O95476 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTDNEP1O95476 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.97■□□□□ 0.47
CTDNEP1O95476 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.96■□□□□ 0.47
CTDNEP1O95476 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTDNEP1O95476 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.96■□□□□ 0.47
CTDNEP1O95476 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDNEP1O95476 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CTDNEP1O95476 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTDNEP1O95476 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDNEP1O95476 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDNEP1O95476 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTDNEP1O95476 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDNEP1O95476 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTDNEP1O95476 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDNEP1O95476 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CTDNEP1O95476 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDNEP1O95476 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CTDNEP1O95476 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDNEP1O95476 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.96■□□□□ 0.47
CTDNEP1O95476 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.96■□□□□ 0.47
CTDNEP1O95476 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms