Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC10.54□□□□□ -0.72
SNCGO76070 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
SNCGO76070 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC10.54□□□□□ -0.72
SNCGO76070 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
SNCGO76070 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC10.54□□□□□ -0.72
SNCGO76070 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SNCGO76070 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
SNCGO76070 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC10.54□□□□□ -0.72
SNCGO76070 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 AC009947.2-201ENST00000444014 672 ntBASIC10.54□□□□□ -0.72
SNCGO76070 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC10.54□□□□□ -0.72
SNCGO76070 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC10.54□□□□□ -0.72
SNCGO76070 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
SNCGO76070 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC10.54□□□□□ -0.72
SNCGO76070 MMAB-206ENST00000540016 945 ntTSL 3 BASIC10.54□□□□□ -0.72
SNCGO76070 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC10.54□□□□□ -0.72
SNCGO76070 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC10.54□□□□□ -0.72
SNCGO76070 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 ANKRD20A6P-201ENST00000618763 204 ntBASIC10.54□□□□□ -0.72
SNCGO76070 AL109923.1-201ENST00000618799 583 ntBASIC10.54□□□□□ -0.72
SNCGO76070 FAM197Y4-202ENST00000622692 608 ntBASIC10.54□□□□□ -0.72
SNCGO76070 IQGAP3-201ENST00000361170 5988 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC10.54□□□□□ -0.72
SNCGO76070 CRTAP-201ENST00000320954 6630 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
SNCGO76070 RASGRF2-201ENST00000265080 8167 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC10.54□□□□□ -0.72
SNCGO76070 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC10.54□□□□□ -0.72
SNCGO76070 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC10.54□□□□□ -0.72
SNCGO76070 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC10.54□□□□□ -0.72
SNCGO76070 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC10.54□□□□□ -0.72
SNCGO76070 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 AC106818.1-201ENST00000623223 3242 ntBASIC10.54□□□□□ -0.72
SNCGO76070 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SNCGO76070 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SNCGO76070 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
SNCGO76070 NUTM2HP-201ENST00000442076 2498 ntBASIC10.53□□□□□ -0.72
SNCGO76070 AC091951.1-201ENST00000512854 2465 ntBASIC10.53□□□□□ -0.72
SNCGO76070 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC10.53□□□□□ -0.72
SNCGO76070 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
SNCGO76070 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC10.53□□□□□ -0.72
SNCGO76070 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC10.53□□□□□ -0.72
SNCGO76070 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SNCGO76070 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
SNCGO76070 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SNCGO76070 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SNCGO76070 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
SNCGO76070 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
SNCGO76070 NRAP-203ENST00000369358 5534 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC10.53□□□□□ -0.72
SNCGO76070 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SNCGO76070 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SNCGO76070 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
SNCGO76070 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
SNCGO76070 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC10.53□□□□□ -0.72
SNCGO76070 AC007663.1-201ENST00000438948 1240 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms