Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLPXO76031 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CLPXO76031 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 KRT18P67-201ENST00000432816 1264 ntBASIC14.27□□□□□ -0.13
CLPXO76031 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 SCARNA2-201ENST00000458748 420 ntBASIC14.27□□□□□ -0.13
CLPXO76031 AF186996.4-201ENST00000467186 377 ntBASIC14.27□□□□□ -0.13
CLPXO76031 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.27□□□□□ -0.13
CLPXO76031 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.27□□□□□ -0.13
CLPXO76031 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CLPXO76031 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.27□□□□□ -0.13
CLPXO76031 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.27□□□□□ -0.13
CLPXO76031 MTDHP3-201ENST00000594186 672 ntBASIC14.27□□□□□ -0.13
CLPXO76031 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.27□□□□□ -0.13
CLPXO76031 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.27□□□□□ -0.13
CLPXO76031 AL355877.3-201ENST00000622820 899 ntBASIC14.27□□□□□ -0.13
CLPXO76031 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.27□□□□□ -0.13
CLPXO76031 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.27□□□□□ -0.13
CLPXO76031 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 U82695.1-201ENST00000635752 1889 ntBASIC14.27□□□□□ -0.13
CLPXO76031 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLPXO76031 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.26□□□□□ -0.13
CLPXO76031 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 PPT1-213ENST00000641319 2388 ntBASIC14.26□□□□□ -0.13
CLPXO76031 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CLPXO76031 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.26□□□□□ -0.13
CLPXO76031 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
CLPXO76031 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CLPXO76031 IL9RP2-201ENST00000423948 1312 ntBASIC14.26□□□□□ -0.13
CLPXO76031 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.26□□□□□ -0.13
CLPXO76031 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CLPXO76031 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.26□□□□□ -0.13
CLPXO76031 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.26□□□□□ -0.13
CLPXO76031 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.26□□□□□ -0.13
CLPXO76031 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.26□□□□□ -0.13
CLPXO76031 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
CLPXO76031 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.26□□□□□ -0.13
CLPXO76031 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
CLPXO76031 AF228730.7-201ENST00000641842 219 ntBASIC14.26□□□□□ -0.13
CLPXO76031 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.26□□□□□ -0.13
CLPXO76031 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.26□□□□□ -0.13
CLPXO76031 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.26□□□□□ -0.13
CLPXO76031 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLPXO76031 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLPXO76031 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLPXO76031 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CLPXO76031 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.26□□□□□ -0.13
CLPXO76031 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLPXO76031 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.25□□□□□ -0.13
CLPXO76031 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.25□□□□□ -0.13
CLPXO76031 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.25□□□□□ -0.13
CLPXO76031 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLPXO76031 AC097359.2-201ENST00000604992 2389 ntBASIC14.25□□□□□ -0.13
CLPXO76031 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.25□□□□□ -0.13
CLPXO76031 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLPXO76031 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.25□□□□□ -0.13
CLPXO76031 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLPXO76031 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CLPXO76031 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CLPXO76031 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.25□□□□□ -0.13
CLPXO76031 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLPXO76031 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms