Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.58□□□□□ -0.24
CCNKO75909 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.58□□□□□ -0.24
CCNKO75909 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.58□□□□□ -0.24
CCNKO75909 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CCNKO75909 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CCNKO75909 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.58□□□□□ -0.24
CCNKO75909 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.58□□□□□ -0.24
CCNKO75909 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.58□□□□□ -0.24
CCNKO75909 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.58□□□□□ -0.24
CCNKO75909 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.58□□□□□ -0.24
CCNKO75909 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CCNKO75909 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.58□□□□□ -0.24
CCNKO75909 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CCNKO75909 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.58□□□□□ -0.24
CCNKO75909 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 KRT18P22-201ENST00000402024 1347 ntBASIC13.58□□□□□ -0.24
CCNKO75909 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.58□□□□□ -0.24
CCNKO75909 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.58□□□□□ -0.24
CCNKO75909 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.58□□□□□ -0.24
CCNKO75909 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CCNKO75909 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNKO75909 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.57□□□□□ -0.24
CCNKO75909 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNKO75909 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CCNKO75909 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CCNKO75909 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CCNKO75909 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNKO75909 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CCNKO75909 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNKO75909 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNKO75909 COX11P1-201ENST00000489116 835 ntBASIC13.57□□□□□ -0.24
CCNKO75909 AC010203.1-204ENST00000548782 407 ntBASIC13.57□□□□□ -0.24
CCNKO75909 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNKO75909 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.57□□□□□ -0.24
CCNKO75909 AC011558.1-201ENST00000623459 338 ntBASIC13.57□□□□□ -0.24
CCNKO75909 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNKO75909 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
CCNKO75909 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CCNKO75909 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CCNKO75909 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CCNKO75909 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CCNKO75909 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
CCNKO75909 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNKO75909 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNKO75909 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.57□□□□□ -0.24
CCNKO75909 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNKO75909 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNKO75909 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNKO75909 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNKO75909 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNKO75909 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.56□□□□□ -0.24
CCNKO75909 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCNKO75909 AL353593.2-201ENST00000602529 1483 ntBASIC13.56□□□□□ -0.24
CCNKO75909 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.56□□□□□ -0.24
CCNKO75909 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNKO75909 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNKO75909 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
CCNKO75909 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNKO75909 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.56□□□□□ -0.24
CCNKO75909 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.56□□□□□ -0.24
CCNKO75909 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNKO75909 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.56□□□□□ -0.24
CCNKO75909 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCNKO75909 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CCNKO75909 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.56□□□□□ -0.24
CCNKO75909 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.56□□□□□ -0.24
CCNKO75909 KRT18P38-201ENST00000449496 1282 ntBASIC13.56□□□□□ -0.24
CCNKO75909 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNKO75909 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
CCNKO75909 MIR4497-201ENST00000583208 89 ntBASIC13.56□□□□□ -0.24
CCNKO75909 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNKO75909 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms