Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PFDN1O60925 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.9□□□□□ -0.18
PFDN1O60925 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
PFDN1O60925 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PFDN1O60925 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
PFDN1O60925 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 AC145098.2-201ENST00000623593 3026 ntBASIC13.9□□□□□ -0.18
PFDN1O60925 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.9□□□□□ -0.18
PFDN1O60925 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 GUK1-205ENST00000366722 850 ntTSL 3 BASIC13.9□□□□□ -0.18
PFDN1O60925 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 ZNRF2P3-201ENST00000424200 374 ntBASIC13.9□□□□□ -0.18
PFDN1O60925 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.9□□□□□ -0.18
PFDN1O60925 AP002982.1-201ENST00000492365 877 ntBASIC13.9□□□□□ -0.18
PFDN1O60925 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.9□□□□□ -0.18
PFDN1O60925 AC109462.3-201ENST00000573934 613 ntBASIC13.9□□□□□ -0.18
PFDN1O60925 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.9□□□□□ -0.18
PFDN1O60925 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.9□□□□□ -0.18
PFDN1O60925 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 AC024563.2-201ENST00000603282 481 ntBASIC13.9□□□□□ -0.18
PFDN1O60925 AC130371.2-201ENST00000619443 611 ntBASIC13.9□□□□□ -0.18
PFDN1O60925 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.9□□□□□ -0.18
PFDN1O60925 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PFDN1O60925 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PFDN1O60925 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 ALK-205ENST00000618119 4646 ntTSL 5 BASIC13.9□□□□□ -0.18
PFDN1O60925 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 AL805961.2-201ENST00000642139 4817 ntBASIC13.9□□□□□ -0.18
PFDN1O60925 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.9□□□□□ -0.18
PFDN1O60925 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.9□□□□□ -0.18
PFDN1O60925 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.9□□□□□ -0.18
PFDN1O60925 AC134407.2-201ENST00000625089 1978 ntBASIC13.9□□□□□ -0.18
PFDN1O60925 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PFDN1O60925 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.9□□□□□ -0.18
PFDN1O60925 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.9□□□□□ -0.18
PFDN1O60925 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 CICP1-201ENST00000416803 2410 ntBASIC13.9□□□□□ -0.18
PFDN1O60925 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PFDN1O60925 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PFDN1O60925 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PFDN1O60925 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
PFDN1O60925 KRT8P49-201ENST00000604166 1432 ntBASIC13.9□□□□□ -0.19
PFDN1O60925 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PFDN1O60925 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.89□□□□□ -0.19
PFDN1O60925 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PFDN1O60925 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.89□□□□□ -0.19
PFDN1O60925 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PFDN1O60925 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PFDN1O60925 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.89□□□□□ -0.19
PFDN1O60925 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.89□□□□□ -0.19
PFDN1O60925 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 AC112698.1-201ENST00000510299 916 ntBASIC13.89□□□□□ -0.19
PFDN1O60925 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.89□□□□□ -0.19
PFDN1O60925 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.89□□□□□ -0.19
PFDN1O60925 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.89□□□□□ -0.19
PFDN1O60925 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
PFDN1O60925 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PFDN1O60925 AL031985.4-201ENST00000642138 673 ntBASIC13.89□□□□□ -0.19
PFDN1O60925 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC13.89□□□□□ -0.19
PFDN1O60925 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PFDN1O60925 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.89□□□□□ -0.19
PFDN1O60925 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms