Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.75■□□□□ 0.11
PRAMEF11O60813 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.75■□□□□ 0.11
PRAMEF11O60813 AC133539.2-201ENST00000604757 467 ntBASIC15.75■□□□□ 0.11
PRAMEF11O60813 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEF11O60813 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF11O60813 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF11O60813 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEF11O60813 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEF11O60813 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF11O60813 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.75■□□□□ 0.11
PRAMEF11O60813 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF11O60813 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.75■□□□□ 0.11
PRAMEF11O60813 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF11O60813 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.75■□□□□ 0.11
PRAMEF11O60813 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PRAMEF11O60813 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRAMEF11O60813 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.75■□□□□ 0.11
PRAMEF11O60813 AC138035.3-201ENST00000622706 2791 ntBASIC15.75■□□□□ 0.11
PRAMEF11O60813 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.75■□□□□ 0.11
PRAMEF11O60813 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PRAMEF11O60813 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 AL109954.1-202ENST00000564051 2148 ntBASIC15.74■□□□□ 0.11
PRAMEF11O60813 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
PRAMEF11O60813 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEF11O60813 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEF11O60813 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 AL138799.1-201ENST00000448213 1675 ntBASIC15.74■□□□□ 0.11
PRAMEF11O60813 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PRAMEF11O60813 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEF11O60813 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEF11O60813 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PRAMEF11O60813 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.74■□□□□ 0.11
PRAMEF11O60813 SOCS2P1-201ENST00000417727 557 ntBASIC15.74■□□□□ 0.11
PRAMEF11O60813 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.74■□□□□ 0.11
PRAMEF11O60813 COX20P2-201ENST00000452636 358 ntBASIC15.74■□□□□ 0.11
PRAMEF11O60813 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.74■□□□□ 0.11
PRAMEF11O60813 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.74■□□□□ 0.11
PRAMEF11O60813 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.74■□□□□ 0.11
PRAMEF11O60813 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 KRT8P22-201ENST00000562317 1415 ntBASIC15.74■□□□□ 0.11
PRAMEF11O60813 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.74■□□□□ 0.11
PRAMEF11O60813 HYMAI-201ENST00000635591 3347 ntBASIC15.74■□□□□ 0.11
PRAMEF11O60813 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PRAMEF11O60813 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRAMEF11O60813 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 AC023024.2-201ENST00000623561 1993 ntBASIC15.73■□□□□ 0.11
PRAMEF11O60813 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 AC098614.1-201ENST00000368528 745 ntBASIC15.73■□□□□ 0.11
PRAMEF11O60813 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 AP006294.1-201ENST00000415407 339 ntBASIC15.73■□□□□ 0.11
PRAMEF11O60813 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 RN7SL692P-201ENST00000464677 288 ntBASIC15.73■□□□□ 0.11
PRAMEF11O60813 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRAMEF11O60813 AL596325.1-201ENST00000563991 1082 ntBASIC15.73■□□□□ 0.11
PRAMEF11O60813 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.73■□□□□ 0.11
PRAMEF11O60813 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms