Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.97□□□□□ -0.17
ZIC3O60481 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ZIC3O60481 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
ZIC3O60481 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.97□□□□□ -0.17
ZIC3O60481 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ZIC3O60481 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.97□□□□□ -0.17
ZIC3O60481 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
ZIC3O60481 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.97□□□□□ -0.17
ZIC3O60481 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ZIC3O60481 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.97□□□□□ -0.17
ZIC3O60481 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.97□□□□□ -0.17
ZIC3O60481 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.97□□□□□ -0.17
ZIC3O60481 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.97□□□□□ -0.17
ZIC3O60481 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.97□□□□□ -0.17
ZIC3O60481 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.97□□□□□ -0.17
ZIC3O60481 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.97□□□□□ -0.17
ZIC3O60481 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.97□□□□□ -0.17
ZIC3O60481 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.97□□□□□ -0.17
ZIC3O60481 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.97□□□□□ -0.17
ZIC3O60481 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
ZIC3O60481 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.97□□□□□ -0.17
ZIC3O60481 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
ZIC3O60481 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ZIC3O60481 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.97□□□□□ -0.17
ZIC3O60481 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.97□□□□□ -0.17
ZIC3O60481 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.96□□□□□ -0.17
ZIC3O60481 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.96□□□□□ -0.17
ZIC3O60481 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
ZIC3O60481 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.96□□□□□ -0.17
ZIC3O60481 TMBIM7P-203ENST00000641617 1718 ntBASIC13.96□□□□□ -0.17
ZIC3O60481 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.96□□□□□ -0.17
ZIC3O60481 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.96□□□□□ -0.17
ZIC3O60481 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.96□□□□□ -0.17
ZIC3O60481 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
ZIC3O60481 ACKR1-201ENST00000368121 1240 ntBASIC13.96□□□□□ -0.17
ZIC3O60481 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.96□□□□□ -0.17
ZIC3O60481 TTTY23B-201ENST00000442790 549 ntBASIC13.96□□□□□ -0.17
ZIC3O60481 AC093433.1-201ENST00000458048 571 ntBASIC13.96□□□□□ -0.17
ZIC3O60481 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ZIC3O60481 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
ZIC3O60481 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.96□□□□□ -0.17
ZIC3O60481 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.96□□□□□ -0.17
ZIC3O60481 AP001063.1-201ENST00000568332 529 ntBASIC13.96□□□□□ -0.17
ZIC3O60481 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.96□□□□□ -0.17
ZIC3O60481 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.96□□□□□ -0.17
ZIC3O60481 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
ZIC3O60481 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.96□□□□□ -0.17
ZIC3O60481 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.96□□□□□ -0.17
ZIC3O60481 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ZIC3O60481 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
ZIC3O60481 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.96□□□□□ -0.17
ZIC3O60481 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.96□□□□□ -0.17
ZIC3O60481 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZIC3O60481 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ZIC3O60481 AC112693.3-201ENST00000624819 1983 ntBASIC13.96□□□□□ -0.18
ZIC3O60481 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ZIC3O60481 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
ZIC3O60481 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.96□□□□□ -0.18
ZIC3O60481 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZIC3O60481 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.95□□□□□ -0.18
ZIC3O60481 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.95□□□□□ -0.18
ZIC3O60481 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZIC3O60481 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZIC3O60481 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ZIC3O60481 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ZIC3O60481 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZIC3O60481 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms