Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.32■□□□□ 0.04
PEX1O43933 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.32■□□□□ 0.04
PEX1O43933 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEX1O43933 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PEX1O43933 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PEX1O43933 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.31■□□□□ 0.04
PEX1O43933 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PEX1O43933 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PEX1O43933 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PEX1O43933 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.31■□□□□ 0.04
PEX1O43933 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PEX1O43933 RNU1-129P-201ENST00000384064 167 ntBASIC15.31■□□□□ 0.04
PEX1O43933 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PEX1O43933 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.31■□□□□ 0.04
PEX1O43933 AL592309.1-201ENST00000443127 649 ntBASIC15.31■□□□□ 0.04
PEX1O43933 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.31■□□□□ 0.04
PEX1O43933 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 U1.21-201ENST00000580816 167 ntBASIC15.31■□□□□ 0.04
PEX1O43933 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.31■□□□□ 0.04
PEX1O43933 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.31■□□□□ 0.04
PEX1O43933 AL031055.1-201ENST00000606362 631 ntBASIC15.31■□□□□ 0.04
PEX1O43933 AC093028.1-201ENST00000622998 982 ntBASIC15.31■□□□□ 0.04
PEX1O43933 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PEX1O43933 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 SBF1P1-201ENST00000444527 5631 ntBASIC15.31■□□□□ 0.04
PEX1O43933 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
PEX1O43933 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
PEX1O43933 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PEX1O43933 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.31■□□□□ 0.04
PEX1O43933 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.31■□□□□ 0.04
PEX1O43933 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEX1O43933 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.31■□□□□ 0.04
PEX1O43933 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.31■□□□□ 0.04
PEX1O43933 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.31■□□□□ 0.04
PEX1O43933 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.31■□□□□ 0.04
PEX1O43933 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.3■□□□□ 0.04
PEX1O43933 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.3■□□□□ 0.04
PEX1O43933 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.3■□□□□ 0.04
PEX1O43933 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.3■□□□□ 0.04
PEX1O43933 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PEX1O43933 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.3■□□□□ 0.04
PEX1O43933 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.3■□□□□ 0.04
PEX1O43933 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.3■□□□□ 0.04
PEX1O43933 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 AC243562.1-201ENST00000560672 389 ntBASIC15.3■□□□□ 0.04
PEX1O43933 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PEX1O43933 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.3■□□□□ 0.04
PEX1O43933 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 PTENP1-202ENST00000532280 3996 ntBASIC15.3■□□□□ 0.04
PEX1O43933 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
PEX1O43933 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PEX1O43933 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.3■□□□□ 0.04
PEX1O43933 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.3■□□□□ 0.04
PEX1O43933 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PEX1O43933 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PEX1O43933 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PEX1O43933 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PEX1O43933 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PEX1O43933 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PEX1O43933 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PEX1O43933 AC092127.1-201ENST00000567093 3455 ntBASIC15.29■□□□□ 0.04
PEX1O43933 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PEX1O43933 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PEX1O43933 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PEX1O43933 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PEX1O43933 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PEX1O43933 MYO15B-237ENST00000642007 4893 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms