Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PHGDHO43175 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PHGDHO43175 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PHGDHO43175 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PHGDHO43175 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.57■□□□□ 0.08
PHGDHO43175 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PHGDHO43175 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PHGDHO43175 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.57■□□□□ 0.08
PHGDHO43175 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.57■□□□□ 0.08
PHGDHO43175 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.57■□□□□ 0.08
PHGDHO43175 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.57■□□□□ 0.08
PHGDHO43175 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
PHGDHO43175 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PHGDHO43175 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PHGDHO43175 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PHGDHO43175 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.56■□□□□ 0.08
PHGDHO43175 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PHGDHO43175 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.56■□□□□ 0.08
PHGDHO43175 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PHGDHO43175 CICP11-201ENST00000434745 2827 ntBASIC15.56■□□□□ 0.08
PHGDHO43175 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PHGDHO43175 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
PHGDHO43175 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PHGDHO43175 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.56■□□□□ 0.08
PHGDHO43175 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PHGDHO43175 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
PHGDHO43175 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.56■□□□□ 0.08
PHGDHO43175 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.56■□□□□ 0.08
PHGDHO43175 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.56■□□□□ 0.08
PHGDHO43175 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.56■□□□□ 0.08
PHGDHO43175 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.56■□□□□ 0.08
PHGDHO43175 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.56■□□□□ 0.08
PHGDHO43175 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.56■□□□□ 0.08
PHGDHO43175 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.56■□□□□ 0.08
PHGDHO43175 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.56■□□□□ 0.08
PHGDHO43175 RN7SL828P-201ENST00000607615 303 ntBASIC15.56■□□□□ 0.08
PHGDHO43175 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PHGDHO43175 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PHGDHO43175 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.56■□□□□ 0.08
PHGDHO43175 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.56■□□□□ 0.08
PHGDHO43175 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PHGDHO43175 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.56■□□□□ 0.08
PHGDHO43175 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.56■□□□□ 0.08
PHGDHO43175 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.56■□□□□ 0.08
PHGDHO43175 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PHGDHO43175 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PHGDHO43175 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
PHGDHO43175 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.55■□□□□ 0.08
PHGDHO43175 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.55■□□□□ 0.08
PHGDHO43175 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.55■□□□□ 0.08
PHGDHO43175 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.55■□□□□ 0.08
PHGDHO43175 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.55■□□□□ 0.08
PHGDHO43175 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.55■□□□□ 0.08
PHGDHO43175 SPDYE17-201ENST00000412399 783 ntBASIC15.55■□□□□ 0.08
PHGDHO43175 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.55■□□□□ 0.08
PHGDHO43175 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms