Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH17O14917 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH17O14917 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDH17O14917 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH17O14917 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDH17O14917 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PCDH17O14917 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.94□□□□□ -0.02
PCDH17O14917 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDH17O14917 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDH17O14917 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDH17O14917 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PCDH17O14917 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDH17O14917 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
PCDH17O14917 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDH17O14917 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PCDH17O14917 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.94□□□□□ -0.02
PCDH17O14917 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDH17O14917 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PCDH17O14917 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PCDH17O14917 HIST3H2BA-201ENST00000436555 524 ntBASIC14.94□□□□□ -0.02
PCDH17O14917 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDH17O14917 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDH17O14917 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PCDH17O14917 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDH17O14917 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDH17O14917 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PCDH17O14917 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDH17O14917 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 AL596325.1-201ENST00000563991 1082 ntBASIC14.94□□□□□ -0.02
PCDH17O14917 AC140912.1-201ENST00000577171 1054 ntBASIC14.94□□□□□ -0.02
PCDH17O14917 SRD5A3P1-201ENST00000603021 949 ntBASIC14.94□□□□□ -0.02
PCDH17O14917 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDH17O14917 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDH17O14917 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
PCDH17O14917 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDH17O14917 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
PCDH17O14917 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
PCDH17O14917 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PCDH17O14917 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDH17O14917 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH17O14917 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH17O14917 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH17O14917 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH17O14917 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PCDH17O14917 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH17O14917 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH17O14917 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 TMBIM7P-203ENST00000641617 1718 ntBASIC14.93□□□□□ -0.02
PCDH17O14917 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 AC098614.1-201ENST00000368528 745 ntBASIC14.93□□□□□ -0.02
PCDH17O14917 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH17O14917 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDH17O14917 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH17O14917 NME2P1-201ENST00000426182 414 ntBASIC14.93□□□□□ -0.02
PCDH17O14917 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDH17O14917 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDH17O14917 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDH17O14917 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDH17O14917 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH17O14917 AC104794.3-201ENST00000566840 1248 ntBASIC14.93□□□□□ -0.02
PCDH17O14917 TP53TG3HP-202ENST00000569755 579 ntBASIC14.93□□□□□ -0.02
PCDH17O14917 AL132655.2-201ENST00000596276 594 ntBASIC14.93□□□□□ -0.02
PCDH17O14917 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDH17O14917 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms