Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM38O00635 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM38O00635 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRIM38O00635 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM38O00635 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM38O00635 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM38O00635 AC112492.5-201ENST00000421897 457 ntBASIC15.75■□□□□ 0.11
TRIM38O00635 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM38O00635 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM38O00635 ACA64.2-201ENST00000459014 129 ntBASIC15.75■□□□□ 0.11
TRIM38O00635 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM38O00635 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM38O00635 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
TRIM38O00635 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM38O00635 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.75■□□□□ 0.11
TRIM38O00635 CTBP2P3-201ENST00000585629 1255 ntBASIC15.75■□□□□ 0.11
TRIM38O00635 AC017083.2-201ENST00000608069 979 ntBASIC15.75■□□□□ 0.11
TRIM38O00635 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM38O00635 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM38O00635 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.75■□□□□ 0.11
TRIM38O00635 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM38O00635 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM38O00635 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM38O00635 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM38O00635 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM38O00635 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM38O00635 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM38O00635 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM38O00635 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM38O00635 AC006486.2-201ENST00000624246 2199 ntBASIC15.75■□□□□ 0.11
TRIM38O00635 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM38O00635 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM38O00635 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM38O00635 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM38O00635 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRIM38O00635 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRIM38O00635 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRIM38O00635 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
TRIM38O00635 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM38O00635 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
TRIM38O00635 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM38O00635 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
TRIM38O00635 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM38O00635 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRIM38O00635 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRIM38O00635 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM38O00635 AC098850.1-201ENST00000419919 790 ntBASIC15.74■□□□□ 0.11
TRIM38O00635 MEP1AP4-201ENST00000423244 1087 ntBASIC15.74■□□□□ 0.11
TRIM38O00635 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRIM38O00635 RN7SL837P-201ENST00000463010 287 ntBASIC15.74■□□□□ 0.11
TRIM38O00635 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 ELK1P1-201ENST00000485699 580 ntBASIC15.74■□□□□ 0.11
TRIM38O00635 KRT17P8-201ENST00000540749 863 ntBASIC15.74■□□□□ 0.11
TRIM38O00635 AC123567.1-201ENST00000548294 1261 ntBASIC15.74■□□□□ 0.11
TRIM38O00635 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM38O00635 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
TRIM38O00635 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM38O00635 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM38O00635 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRIM38O00635 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRIM38O00635 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRIM38O00635 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM38O00635 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM38O00635 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM38O00635 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM38O00635 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM38O00635 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM38O00635 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM38O00635 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRIM38O00635 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
TRIM38O00635 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM38O00635 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRIM38O00635 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM38O00635 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
TRIM38O00635 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM38O00635 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
TRIM38O00635 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM38O00635 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM38O00635 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.73■□□□□ 0.11
TRIM38O00635 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM38O00635 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms