Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.32■□□□□ 0.2
SOX1O00570 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SOX1O00570 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.32■□□□□ 0.2
SOX1O00570 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.32■□□□□ 0.2
SOX1O00570 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX1O00570 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX1O00570 AL603756.1-201ENST00000606511 2163 ntBASIC16.31■□□□□ 0.2
SOX1O00570 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SOX1O00570 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SOX1O00570 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX1O00570 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SOX1O00570 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX1O00570 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.31■□□□□ 0.2
SOX1O00570 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SOX1O00570 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.31■□□□□ 0.2
SOX1O00570 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SOX1O00570 ENPP7P8-202ENST00000527856 1345 ntBASIC16.31■□□□□ 0.2
SOX1O00570 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX1O00570 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.31■□□□□ 0.2
SOX1O00570 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.31■□□□□ 0.2
SOX1O00570 AC093909.3-201ENST00000504783 336 ntBASIC16.31■□□□□ 0.2
SOX1O00570 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.31■□□□□ 0.2
SOX1O00570 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.31■□□□□ 0.2
SOX1O00570 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.31■□□□□ 0.2
SOX1O00570 AC138466.5-201ENST00000624002 808 ntBASIC16.31■□□□□ 0.2
SOX1O00570 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX1O00570 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.31■□□□□ 0.2
SOX1O00570 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
SOX1O00570 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX1O00570 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX1O00570 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SOX1O00570 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SOX1O00570 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.3■□□□□ 0.2
SOX1O00570 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SOX1O00570 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 AL592424.1-201ENST00000563624 1536 ntBASIC16.3■□□□□ 0.2
SOX1O00570 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.3■□□□□ 0.2
SOX1O00570 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.3■□□□□ 0.2
SOX1O00570 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SOX1O00570 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.3■□□□□ 0.2
SOX1O00570 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.3■□□□□ 0.2
SOX1O00570 CHCHD2P9-201ENST00000461726 456 ntBASIC16.3■□□□□ 0.2
SOX1O00570 MIR5001-201ENST00000580185 100 ntBASIC16.3■□□□□ 0.2
SOX1O00570 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.3■□□□□ 0.2
SOX1O00570 AL358472.3-201ENST00000608147 415 ntBASIC16.3■□□□□ 0.2
SOX1O00570 AC087392.5-201ENST00000612517 489 ntBASIC16.3■□□□□ 0.2
SOX1O00570 AC084781.1-201ENST00000613737 656 ntBASIC16.3■□□□□ 0.2
SOX1O00570 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SOX1O00570 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.3■□□□□ 0.2
SOX1O00570 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.3■□□□□ 0.2
SOX1O00570 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SOX1O00570 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.3■□□□□ 0.2
SOX1O00570 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 GGT3P-204ENST00000453783 1664 ntBASIC16.3■□□□□ 0.2
SOX1O00570 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SOX1O00570 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SOX1O00570 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.3■□□□□ 0.2
SOX1O00570 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SOX1O00570 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SOX1O00570 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.29■□□□□ 0.2
SOX1O00570 NOC2LP2-201ENST00000407594 1944 ntBASIC16.29■□□□□ 0.2
SOX1O00570 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.29■□□□□ 0.2
SOX1O00570 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SOX1O00570 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SOX1O00570 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX1O00570 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX1O00570 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SOX1O00570 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SOX1O00570 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX1O00570 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SOX1O00570 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX1O00570 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.29■□□□□ 0.2
SOX1O00570 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.29■□□□□ 0.2
SOX1O00570 AQP7P5-201ENST00000428759 1049 ntBASIC16.29■□□□□ 0.2
SOX1O00570 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.29■□□□□ 0.2
SOX1O00570 AQP7P4-201ENST00000447083 1042 ntBASIC16.29■□□□□ 0.2
SOX1O00570 AQP7P2-201ENST00000453967 1041 ntBASIC16.29■□□□□ 0.2
SOX1O00570 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC16.29■□□□□ 0.2
SOX1O00570 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.29■□□□□ 0.2
SOX1O00570 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX1O00570 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SOX1O00570 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.29■□□□□ 0.2
SOX1O00570 MIR3180-2-201ENST00000581748 88 ntBASIC16.29■□□□□ 0.2
SOX1O00570 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC16.29■□□□□ 0.2
SOX1O00570 MIR4472-1-201ENST00000584349 80 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms