Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXN3O00409 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXN3O00409 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXN3O00409 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXN3O00409 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXN3O00409 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXN3O00409 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXN3O00409 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.69■□□□□ 0.26
FOXN3O00409 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.69■□□□□ 0.26
FOXN3O00409 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXN3O00409 AC055876.3-201ENST00000431496 288 ntBASIC16.69■□□□□ 0.26
FOXN3O00409 AC241585.1-201ENST00000433527 519 ntBASIC16.69■□□□□ 0.26
FOXN3O00409 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXN3O00409 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.69■□□□□ 0.26
FOXN3O00409 AC009477.1-201ENST00000452936 217 ntBASIC16.69■□□□□ 0.26
FOXN3O00409 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXN3O00409 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.69■□□□□ 0.26
FOXN3O00409 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.69■□□□□ 0.26
FOXN3O00409 AC138649.4-201ENST00000612222 287 ntBASIC16.69■□□□□ 0.26
FOXN3O00409 AC004461.2-201ENST00000629517 803 ntBASIC16.69■□□□□ 0.26
FOXN3O00409 CICP24-201ENST00000605464 2705 ntBASIC16.69■□□□□ 0.26
FOXN3O00409 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXN3O00409 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXN3O00409 AL121723.1-201ENST00000445194 1519 ntBASIC16.69■□□□□ 0.26
FOXN3O00409 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXN3O00409 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
FOXN3O00409 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXN3O00409 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXN3O00409 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXN3O00409 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXN3O00409 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXN3O00409 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXN3O00409 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.68■□□□□ 0.26
FOXN3O00409 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.68■□□□□ 0.26
FOXN3O00409 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.68■□□□□ 0.26
FOXN3O00409 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXN3O00409 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
FOXN3O00409 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.68■□□□□ 0.26
FOXN3O00409 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.68■□□□□ 0.26
FOXN3O00409 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
FOXN3O00409 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.68■□□□□ 0.26
FOXN3O00409 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
FOXN3O00409 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.68■□□□□ 0.26
FOXN3O00409 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.68■□□□□ 0.26
FOXN3O00409 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.68■□□□□ 0.26
FOXN3O00409 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
FOXN3O00409 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.68■□□□□ 0.26
FOXN3O00409 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXN3O00409 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
FOXN3O00409 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXN3O00409 AC138969.3-201ENST00000546612 1459 ntBASIC16.67■□□□□ 0.26
FOXN3O00409 AC138932.2-201ENST00000548268 1459 ntBASIC16.67■□□□□ 0.26
FOXN3O00409 AC126755.4-201ENST00000549796 1459 ntBASIC16.67■□□□□ 0.26
FOXN3O00409 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.67■□□□□ 0.26
FOXN3O00409 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.67■□□□□ 0.26
FOXN3O00409 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXN3O00409 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.67■□□□□ 0.26
FOXN3O00409 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
FOXN3O00409 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
FOXN3O00409 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXN3O00409 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXN3O00409 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXN3O00409 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXN3O00409 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXN3O00409 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXN3O00409 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXN3O00409 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXN3O00409 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXN3O00409 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXN3O00409 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXN3O00409 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.67■□□□□ 0.26
FOXN3O00409 AC114501.2-201ENST00000439631 535 ntBASIC16.67■□□□□ 0.26
FOXN3O00409 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXN3O00409 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.67■□□□□ 0.26
FOXN3O00409 IGHV3-42-201ENST00000520410 361 ntBASIC16.67■□□□□ 0.26
FOXN3O00409 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.67■□□□□ 0.26
FOXN3O00409 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.67■□□□□ 0.26
FOXN3O00409 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXN3O00409 AC025181.2-201ENST00000606994 802 ntBASIC16.67■□□□□ 0.26
FOXN3O00409 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
FOXN3O00409 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms