Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RPL37AP1-201ENST00000412502 279 ntBASIC14.8□□□□□ -0.04
UPK1AO00322 AL080243.2-201ENST00000418783 582 ntBASIC14.8□□□□□ -0.04
UPK1AO00322 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
UPK1AO00322 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.8□□□□□ -0.04
UPK1AO00322 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.8□□□□□ -0.04
UPK1AO00322 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.8□□□□□ -0.04
UPK1AO00322 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.8□□□□□ -0.04
UPK1AO00322 AC015911.4-201ENST00000588022 1070 ntBASIC14.8□□□□□ -0.04
UPK1AO00322 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.8□□□□□ -0.04
UPK1AO00322 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.8□□□□□ -0.04
UPK1AO00322 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
UPK1AO00322 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
UPK1AO00322 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
UPK1AO00322 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.79□□□□□ -0.04
UPK1AO00322 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.79□□□□□ -0.04
UPK1AO00322 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 ZBED1P1-201ENST00000502364 1930 ntBASIC14.79□□□□□ -0.04
UPK1AO00322 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
UPK1AO00322 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
UPK1AO00322 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.79□□□□□ -0.04
UPK1AO00322 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.79□□□□□ -0.04
UPK1AO00322 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
UPK1AO00322 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.79□□□□□ -0.04
UPK1AO00322 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.79□□□□□ -0.04
UPK1AO00322 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UPK1AO00322 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.79□□□□□ -0.04
UPK1AO00322 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.79□□□□□ -0.04
UPK1AO00322 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1AO00322 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.79□□□□□ -0.04
UPK1AO00322 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.79□□□□□ -0.04
UPK1AO00322 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
UPK1AO00322 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
UPK1AO00322 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK1AO00322 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK1AO00322 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
UPK1AO00322 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.78□□□□□ -0.04
UPK1AO00322 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.78□□□□□ -0.04
UPK1AO00322 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK1AO00322 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 HLA-V-204ENST00000476601 1289 ntBASIC14.78□□□□□ -0.04
UPK1AO00322 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK1AO00322 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.78□□□□□ -0.04
UPK1AO00322 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.78□□□□□ -0.04
UPK1AO00322 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.78□□□□□ -0.04
UPK1AO00322 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.78□□□□□ -0.04
UPK1AO00322 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.78□□□□□ -0.04
UPK1AO00322 AC051619.7-201ENST00000568314 623 ntBASIC14.78□□□□□ -0.04
UPK1AO00322 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK1AO00322 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
UPK1AO00322 AC093028.1-201ENST00000622998 982 ntBASIC14.78□□□□□ -0.04
UPK1AO00322 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
UPK1AO00322 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 AC041040.2-201ENST00000622926 2899 ntBASIC14.78□□□□□ -0.04
UPK1AO00322 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms