Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 AC051619.7-201ENST00000568314 623 ntBASIC17.8■□□□□ 0.44
CLIC4Q9Y696 AC015910.1-201ENST00000579400 975 ntBASIC17.8■□□□□ 0.44
CLIC4Q9Y696 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 AL136379.1-201ENST00000623471 2642 ntBASIC17.8■□□□□ 0.44
CLIC4Q9Y696 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 LINC01101-201ENST00000622953 1884 ntBASIC17.8■□□□□ 0.44
CLIC4Q9Y696 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC4Q9Y696 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 AL691403.2-201ENST00000618460 490 ntBASIC17.79■□□□□ 0.44
CLIC4Q9Y696 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 AL109936.8-201ENST00000641772 604 ntBASIC17.79■□□□□ 0.44
CLIC4Q9Y696 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 FGD5P1-202ENST00000614866 2498 ntBASIC17.79■□□□□ 0.44
CLIC4Q9Y696 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms