Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 UGT1A2P-201ENST00000454886 866 ntBASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 AC036164.1-201ENST00000570544 333 ntBASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 AC136621.1-201ENST00000624017 2304 ntBASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.04□□□□□ -0.16
HDGFL3Q9Y3E1 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 SPDYE19P-201ENST00000338590 713 ntBASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 AL589987.1-201ENST00000453380 819 ntBASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 AL391069.4-201ENST00000609583 481 ntBASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDGFL3Q9Y3E1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HDGFL3Q9Y3E1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HDGFL3Q9Y3E1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms