Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FNDC3AQ9Y2H6 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.03■□□□□ 0.16
FNDC3AQ9Y2H6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.03■□□□□ 0.16
FNDC3AQ9Y2H6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FNDC3AQ9Y2H6 AP001282.1-201ENST00000531301 1499 ntBASIC16.03■□□□□ 0.16
FNDC3AQ9Y2H6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.03■□□□□ 0.16
FNDC3AQ9Y2H6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FNDC3AQ9Y2H6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FNDC3AQ9Y2H6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 SLC7A15P-201ENST00000424028 1363 ntBASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 MYO15B-237ENST00000642007 4893 ntBASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 RPS2P32-201ENST00000439199 892 ntBASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 AC114501.2-201ENST00000439631 535 ntBASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 KRT17P8-201ENST00000540749 863 ntBASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 MIR6805-201ENST00000615055 62 ntBASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.02■□□□□ 0.16
FNDC3AQ9Y2H6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.02■□□□□ 0.15
FNDC3AQ9Y2H6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.02■□□□□ 0.15
FNDC3AQ9Y2H6 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
FNDC3AQ9Y2H6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
FNDC3AQ9Y2H6 CICP13-201ENST00000422015 2789 ntBASIC16.02■□□□□ 0.15
FNDC3AQ9Y2H6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FNDC3AQ9Y2H6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.02■□□□□ 0.15
FNDC3AQ9Y2H6 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
FNDC3AQ9Y2H6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.02■□□□□ 0.15
FNDC3AQ9Y2H6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.02■□□□□ 0.15
FNDC3AQ9Y2H6 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FNDC3AQ9Y2H6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.15
FNDC3AQ9Y2H6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
FNDC3AQ9Y2H6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.02■□□□□ 0.15
FNDC3AQ9Y2H6 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FNDC3AQ9Y2H6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 SERBP1P3-201ENST00000459980 809 ntBASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 AC055876.2-201ENST00000531834 546 ntBASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 RAB43P1-201ENST00000561790 589 ntBASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FNDC3AQ9Y2H6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms