Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KCMF1Q9P0J7 TMBIM7P-203ENST00000641617 1718 ntBASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 AC087481.3-201ENST00000602886 1894 ntBASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 AC092384.3-202ENST00000564646 2873 ntBASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 AL035633.1-201ENST00000406139 838 ntBASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 SERBP1P5-201ENST00000510079 1181 ntBASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 AC144831.1-201ENST00000573312 2656 ntBASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 NORAD-201ENST00000565493 5339 ntBASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCMF1Q9P0J7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 AL133267.1-201ENST00000398220 340 ntBASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 AL121723.1-201ENST00000445194 1519 ntBASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 SPTLC1P1-201ENST00000447199 261 ntBASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
KCMF1Q9P0J7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms