Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
MKS1Q9NXB0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MKS1Q9NXB0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.4■□□□□ 0.06
MKS1Q9NXB0 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MKS1Q9NXB0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MKS1Q9NXB0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.4■□□□□ 0.06
MKS1Q9NXB0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.4■□□□□ 0.06
MKS1Q9NXB0 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.4■□□□□ 0.06
MKS1Q9NXB0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MKS1Q9NXB0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 AC136759.1-202ENST00000530858 2194 ntBASIC15.39■□□□□ 0.05
MKS1Q9NXB0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 AC018442.1-201ENST00000421439 2061 ntBASIC15.39■□□□□ 0.05
MKS1Q9NXB0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 RPL13AP23-201ENST00000480739 586 ntBASIC15.39■□□□□ 0.05
MKS1Q9NXB0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 AC055717.3-201ENST00000622967 595 ntBASIC15.39■□□□□ 0.05
MKS1Q9NXB0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.39■□□□□ 0.05
MKS1Q9NXB0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.39■□□□□ 0.05
MKS1Q9NXB0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
MKS1Q9NXB0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 AL353705.2-201ENST00000428243 662 ntBASIC15.38■□□□□ 0.05
MKS1Q9NXB0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 AC069335.1-201ENST00000489972 472 ntBASIC15.38■□□□□ 0.05
MKS1Q9NXB0 SLED1-202ENST00000512051 380 ntBASIC15.38■□□□□ 0.05
MKS1Q9NXB0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.38■□□□□ 0.05
MKS1Q9NXB0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms