Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 FAM86MP-201ENST00000340703 885 ntBASIC18.63■□□□□ 0.57
SALL1Q9NSC2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 ACTBP11-201ENST00000436287 1126 ntBASIC18.63■□□□□ 0.57
SALL1Q9NSC2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.63■□□□□ 0.57
SALL1Q9NSC2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 SSR4P1-203ENST00000599569 2260 ntBASIC18.62■□□□□ 0.57
SALL1Q9NSC2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 OR6D1P-202ENST00000641007 5290 ntBASIC18.62■□□□□ 0.57
SALL1Q9NSC2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 AC007787.1-201ENST00000588095 1583 ntBASIC18.62■□□□□ 0.57
SALL1Q9NSC2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SALL1Q9NSC2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 AC073347.1-201ENST00000421633 2643 ntBASIC18.61■□□□□ 0.57
SALL1Q9NSC2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 AC104457.1-201ENST00000401024 814 ntBASIC18.61■□□□□ 0.57
SALL1Q9NSC2 RPL5P21-201ENST00000404620 815 ntBASIC18.61■□□□□ 0.57
SALL1Q9NSC2 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 FAM197Y7-201ENST00000432892 766 ntBASIC18.61■□□□□ 0.57
SALL1Q9NSC2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 YBX1P6-201ENST00000442962 1002 ntBASIC18.61■□□□□ 0.57
SALL1Q9NSC2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 AC004066.1-201ENST00000502488 802 ntBASIC18.61■□□□□ 0.57
SALL1Q9NSC2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms