Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 AL353637.1-201ENST00000451571 732 ntBASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 AC100827.2-201ENST00000563214 1194 ntBASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 RN7SL555P-201ENST00000584742 339 ntBASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 AL136295.7-201ENST00000619226 1200 ntBASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 AC112504.1-201ENST00000623415 1841 ntBASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 AC092364.2-201ENST00000596710 2692 ntBASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.27■□□□□ 0.68
CNTNAP4Q9C0A0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CNTNAP4Q9C0A0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CNTNAP4Q9C0A0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CNTNAP4Q9C0A0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.27■□□□□ 0.67
CNTNAP4Q9C0A0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CNTNAP4Q9C0A0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CNTNAP4Q9C0A0 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 IQSEC3P1-201ENST00000538799 536 ntBASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 SHC1P1-201ENST00000425230 1745 ntBASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 PCDHA12-202ENST00000613593 2588 ntBASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.26■□□□□ 0.67
CNTNAP4Q9C0A0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 LY6E-208ENST00000520531 490 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 SNORD3B-2-202ENST00000571722 791 ntBASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 AL132994.2-201ENST00000603120 687 ntBASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 AC138696.2-201ENST00000607376 223 ntBASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 CDK7-214ENST00000626796 358 ntTSL 5 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 AC006453.1-201ENST00000636037 1257 ntBASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 REXO1L5P-201ENST00000622260 2098 ntBASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms