Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.27■□□□□ 0.2
SMOQ99835 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SMOQ99835 SLC25A47P1-201ENST00000531577 414 ntBASIC16.27■□□□□ 0.2
SMOQ99835 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.27■□□□□ 0.2
SMOQ99835 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.27■□□□□ 0.2
SMOQ99835 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.27■□□□□ 0.2
SMOQ99835 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.27■□□□□ 0.2
SMOQ99835 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SMOQ99835 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SMOQ99835 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.27■□□□□ 0.2
SMOQ99835 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.27■□□□□ 0.2
SMOQ99835 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMOQ99835 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.27■□□□□ 0.19
SMOQ99835 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.27■□□□□ 0.19
SMOQ99835 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMOQ99835 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.27■□□□□ 0.19
SMOQ99835 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMOQ99835 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SMOQ99835 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMOQ99835 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SMOQ99835 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMOQ99835 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SMOQ99835 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 AC093525.8-201ENST00000624099 1342 ntBASIC16.26■□□□□ 0.19
SMOQ99835 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
SMOQ99835 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SMOQ99835 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SMOQ99835 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
SMOQ99835 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SMOQ99835 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SMOQ99835 AC068587.3-201ENST00000526613 355 ntBASIC16.26■□□□□ 0.19
SMOQ99835 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.26■□□□□ 0.19
SMOQ99835 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.26■□□□□ 0.19
SMOQ99835 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.26■□□□□ 0.19
SMOQ99835 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.26■□□□□ 0.19
SMOQ99835 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.26■□□□□ 0.19
SMOQ99835 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SMOQ99835 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SMOQ99835 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SMOQ99835 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.26■□□□□ 0.19
SMOQ99835 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.26■□□□□ 0.19
SMOQ99835 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.26■□□□□ 0.19
SMOQ99835 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SMOQ99835 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMOQ99835 AC007787.1-201ENST00000588095 1583 ntBASIC16.26■□□□□ 0.19
SMOQ99835 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SMOQ99835 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.25■□□□□ 0.19
SMOQ99835 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 TMBIM7P-203ENST00000641617 1718 ntBASIC16.25■□□□□ 0.19
SMOQ99835 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.25■□□□□ 0.19
SMOQ99835 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SMOQ99835 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SMOQ99835 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SMOQ99835 ACKR1-201ENST00000368121 1240 ntBASIC16.25■□□□□ 0.19
SMOQ99835 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.25■□□□□ 0.19
SMOQ99835 AC112492.5-201ENST00000421897 457 ntBASIC16.25■□□□□ 0.19
SMOQ99835 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.25■□□□□ 0.19
SMOQ99835 AP001889.1-201ENST00000525414 633 ntBASIC16.25■□□□□ 0.19
SMOQ99835 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.25■□□□□ 0.19
SMOQ99835 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMOQ99835 PTP4A1P2-201ENST00000546033 454 ntBASIC16.25■□□□□ 0.19
SMOQ99835 AC009486.1-201ENST00000569860 813 ntBASIC16.25■□□□□ 0.19
SMOQ99835 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.25■□□□□ 0.19
SMOQ99835 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.25■□□□□ 0.19
SMOQ99835 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.25■□□□□ 0.19
SMOQ99835 BTNL10-201ENST00000595971 695 ntBASIC16.25■□□□□ 0.19
SMOQ99835 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.25■□□□□ 0.19
SMOQ99835 AL162274.1-201ENST00000617191 1098 ntBASIC16.25■□□□□ 0.19
SMOQ99835 BX539320.1-201ENST00000623759 877 ntBASIC16.25■□□□□ 0.19
SMOQ99835 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.25■□□□□ 0.19
SMOQ99835 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms