Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG4P5Q96PW8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CSPG4P5Q96PW8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.08■□□□□ 0.16
CSPG4P5Q96PW8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.08■□□□□ 0.16
CSPG4P5Q96PW8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG4P5Q96PW8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG4P5Q96PW8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG4P5Q96PW8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG4P5Q96PW8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 MEIS3P1-201ENST00000495167 958 ntBASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 AC104794.3-201ENST00000566840 1248 ntBASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 AC027796.2-201ENST00000575326 344 ntBASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 AL391069.4-201ENST00000609583 481 ntBASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 TCAF2P1-201ENST00000291129 2421 ntBASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 AC011270.2-201ENST00000624293 2550 ntBASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 AC103702.1-201ENST00000548801 2630 ntBASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CSPG4P5Q96PW8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 AP002414.2-201ENST00000591780 3365 ntBASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 TNRC18P2-201ENST00000417666 2714 ntBASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CSPG4P5Q96PW8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms