Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
GAFA1Q96PS6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 KRT8P44-201ENST00000441609 1350 ntBASIC12.95□□□□□ -0.34
GAFA1Q96PS6 AL391825.1-201ENST00000457671 1364 ntBASIC12.95□□□□□ -0.34
GAFA1Q96PS6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 AC126177.1-201ENST00000547829 2218 ntBASIC12.95□□□□□ -0.34
GAFA1Q96PS6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 AC093726.1-201ENST00000608064 963 ntBASIC12.95□□□□□ -0.34
GAFA1Q96PS6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
GAFA1Q96PS6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 AC087499.6-201ENST00000411576 835 ntBASIC12.94□□□□□ -0.34
GAFA1Q96PS6 PIN1P1-201ENST00000412108 996 ntBASIC12.94□□□□□ -0.34
GAFA1Q96PS6 AL353779.1-201ENST00000434793 351 ntBASIC12.94□□□□□ -0.34
GAFA1Q96PS6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 API5-211ENST00000534695 560 ntTSL 5 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 AC123567.1-201ENST00000548294 1261 ntBASIC12.94□□□□□ -0.34
GAFA1Q96PS6 AC190387.1-201ENST00000551683 408 ntBASIC12.94□□□□□ -0.34
GAFA1Q96PS6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms