Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 AC074338.1-201ENST00000416825 156 ntBASIC16.53■□□□□ 0.24
TRIM11Q96F44 TSEN15P1-201ENST00000423257 515 ntBASIC16.53■□□□□ 0.24
TRIM11Q96F44 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 RN7SL618P-201ENST00000477850 296 ntBASIC16.53■□□□□ 0.24
TRIM11Q96F44 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 AGAP7P-201ENST00000582299 2062 ntBASIC16.53■□□□□ 0.24
TRIM11Q96F44 AGAP14-201ENST00000624701 2060 ntBASIC16.53■□□□□ 0.24
TRIM11Q96F44 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM11Q96F44 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM11Q96F44 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM11Q96F44 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM11Q96F44 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM11Q96F44 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM11Q96F44 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM11Q96F44 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
TRIM11Q96F44 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM11Q96F44 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
TRIM11Q96F44 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM11Q96F44 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM11Q96F44 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM11Q96F44 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM11Q96F44 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM11Q96F44 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM11Q96F44 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TRIM11Q96F44 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM11Q96F44 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM11Q96F44 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TRIM11Q96F44 AC015922.1-201ENST00000421102 1152 ntBASIC16.52■□□□□ 0.24
TRIM11Q96F44 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM11Q96F44 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM11Q96F44 DNAJB3-202ENST00000449667 1266 ntBASIC16.52■□□□□ 0.24
TRIM11Q96F44 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.52■□□□□ 0.24
TRIM11Q96F44 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM11Q96F44 AC025678.2-201ENST00000562061 970 ntBASIC16.52■□□□□ 0.24
TRIM11Q96F44 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
TRIM11Q96F44 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM11Q96F44 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM11Q96F44 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM11Q96F44 SPDYE12P-201ENST00000618416 771 ntBASIC16.52■□□□□ 0.24
TRIM11Q96F44 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM11Q96F44 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
TRIM11Q96F44 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.52■□□□□ 0.23
TRIM11Q96F44 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM11Q96F44 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM11Q96F44 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM11Q96F44 LINC01101-201ENST00000622953 1884 ntBASIC16.52■□□□□ 0.23
TRIM11Q96F44 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.52■□□□□ 0.23
TRIM11Q96F44 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.52■□□□□ 0.23
TRIM11Q96F44 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.52■□□□□ 0.23
TRIM11Q96F44 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM11Q96F44 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM11Q96F44 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM11Q96F44 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 AC091951.1-201ENST00000512854 2465 ntBASIC16.51■□□□□ 0.23
TRIM11Q96F44 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 GHSR-202ENST00000427970 912 ntBASIC16.51■□□□□ 0.23
TRIM11Q96F44 AC125807.1-201ENST00000483097 614 ntBASIC16.51■□□□□ 0.23
TRIM11Q96F44 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 AC109322.1-201ENST00000524499 1264 ntBASIC16.51■□□□□ 0.23
TRIM11Q96F44 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms