Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 CR383656.12-201ENST00000549567 513 ntBASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 TP53TG3HP-202ENST00000569755 579 ntBASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 SRD5A3P1-201ENST00000603021 949 ntBASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 AC004461.2-201ENST00000629517 803 ntBASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 AC069224.1-201ENST00000566372 1715 ntBASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.54■□□□□ 0.08
SH3KBP1Q96B97 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 EEF1DP4-201ENST00000446006 880 ntBASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 AL035252.4-201ENST00000624174 288 ntBASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 BNIP3P1-202ENST00000550043 1585 ntBASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 AP005117.1-202ENST00000581724 1908 ntBASIC15.53■□□□□ 0.08
SH3KBP1Q96B97 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 AC055876.2-201ENST00000531834 546 ntBASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 TPRX2P-201ENST00000535362 881 ntBASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 AC025048.3-201ENST00000590609 569 ntBASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 AC005702.4-201ENST00000618393 416 ntBASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.52■□□□□ 0.08
SH3KBP1Q96B97 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.52■□□□□ 0.07
SH3KBP1Q96B97 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.52■□□□□ 0.07
SH3KBP1Q96B97 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SH3KBP1Q96B97 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SH3KBP1Q96B97 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SH3KBP1Q96B97 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SH3KBP1Q96B97 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.52■□□□□ 0.07
SH3KBP1Q96B97 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
SH3KBP1Q96B97 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
SH3KBP1Q96B97 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms