Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AL122018.1-201ENST00000446607 2310 ntBASIC14.06□□□□□ -0.16
CPNE4Q96A23 AC007950.2-201ENST00000615045 2347 ntBASIC14.06□□□□□ -0.16
CPNE4Q96A23 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE4Q96A23 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE4Q96A23 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 AL133267.1-201ENST00000398220 340 ntBASIC14.06□□□□□ -0.16
CPNE4Q96A23 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 AL589987.1-201ENST00000453380 819 ntBASIC14.06□□□□□ -0.16
CPNE4Q96A23 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE4Q96A23 KRT18P43-201ENST00000469825 1281 ntBASIC14.06□□□□□ -0.16
CPNE4Q96A23 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE4Q96A23 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 AC023310.3-201ENST00000557027 670 ntBASIC14.06□□□□□ -0.16
CPNE4Q96A23 AC100756.1-201ENST00000562736 682 ntBASIC14.06□□□□□ -0.16
CPNE4Q96A23 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 AC138749.3-201ENST00000567691 622 ntBASIC14.06□□□□□ -0.16
CPNE4Q96A23 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 AC116165.1-201ENST00000611806 668 ntBASIC14.06□□□□□ -0.16
CPNE4Q96A23 AL158212.4-201ENST00000624062 1286 ntBASIC14.06□□□□□ -0.16
CPNE4Q96A23 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE4Q96A23 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE4Q96A23 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE4Q96A23 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE4Q96A23 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE4Q96A23 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.06□□□□□ -0.16
CPNE4Q96A23 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE4Q96A23 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE4Q96A23 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE4Q96A23 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 KRT18P64-201ENST00000434946 1219 ntBASIC14.05□□□□□ -0.16
CPNE4Q96A23 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 CRB3P1-201ENST00000449338 276 ntBASIC14.05□□□□□ -0.16
CPNE4Q96A23 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 AC190387.1-201ENST00000551683 408 ntBASIC14.05□□□□□ -0.16
CPNE4Q96A23 AC140912.1-201ENST00000577171 1054 ntBASIC14.05□□□□□ -0.16
CPNE4Q96A23 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 AC004790.1-201ENST00000612686 536 ntBASIC14.05□□□□□ -0.16
CPNE4Q96A23 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.05□□□□□ -0.16
CPNE4Q96A23 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CPNE4Q96A23 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CPNE4Q96A23 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.04□□□□□ -0.16
CPNE4Q96A23 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.04□□□□□ -0.16
CPNE4Q96A23 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE4Q96A23 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms