Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 AC023024.2-201ENST00000623561 1993 ntBASIC17.66■□□□□ 0.42
SMARCE1Q969G3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 AC023908.3-201ENST00000564211 3047 ntBASIC17.66■□□□□ 0.42
SMARCE1Q969G3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCE1Q969G3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 ELL2P1-201ENST00000413990 1906 ntBASIC17.65■□□□□ 0.42
SMARCE1Q969G3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 AL353705.2-201ENST00000428243 662 ntBASIC17.65■□□□□ 0.42
SMARCE1Q969G3 AC005237.2-201ENST00000434368 219 ntBASIC17.65■□□□□ 0.42
SMARCE1Q969G3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 AC105339.1-204ENST00000636249 355 ntBASIC17.65■□□□□ 0.42
SMARCE1Q969G3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 CICP24-201ENST00000605464 2705 ntBASIC17.65■□□□□ 0.42
SMARCE1Q969G3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCE1Q969G3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.64■□□□□ 0.42
SMARCE1Q969G3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SMARCE1Q969G3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SMARCE1Q969G3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.64■□□□□ 0.42
SMARCE1Q969G3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SMARCE1Q969G3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 CEND1P1-201ENST00000451006 455 ntBASIC17.64■□□□□ 0.41
SMARCE1Q969G3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 AC022145.2-201ENST00000598203 171 ntBASIC17.64■□□□□ 0.41
SMARCE1Q969G3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.64■□□□□ 0.41
SMARCE1Q969G3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms