Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
DDX1Q92499 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.59■□□□□ 0.25
DDX1Q92499 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.59■□□□□ 0.25
DDX1Q92499 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
DDX1Q92499 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.59■□□□□ 0.25
DDX1Q92499 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 SPTLC1P1-201ENST00000447199 261 ntBASIC16.59■□□□□ 0.25
DDX1Q92499 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.59■□□□□ 0.25
DDX1Q92499 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.59■□□□□ 0.25
DDX1Q92499 AC092337.1-201ENST00000568699 1129 ntBASIC16.59■□□□□ 0.25
DDX1Q92499 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
DDX1Q92499 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.59■□□□□ 0.25
DDX1Q92499 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.59■□□□□ 0.25
DDX1Q92499 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
DDX1Q92499 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.59■□□□□ 0.25
DDX1Q92499 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
DDX1Q92499 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
DDX1Q92499 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
DDX1Q92499 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
DDX1Q92499 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
DDX1Q92499 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
DDX1Q92499 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
DDX1Q92499 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
DDX1Q92499 AC023824.1-201ENST00000562945 2975 ntBASIC16.58■□□□□ 0.24
DDX1Q92499 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.58■□□□□ 0.24
DDX1Q92499 AL353779.1-201ENST00000434793 351 ntBASIC16.58■□□□□ 0.24
DDX1Q92499 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
DDX1Q92499 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.58■□□□□ 0.24
DDX1Q92499 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
DDX1Q92499 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.58■□□□□ 0.24
DDX1Q92499 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.58■□□□□ 0.24
DDX1Q92499 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
DDX1Q92499 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.58■□□□□ 0.24
DDX1Q92499 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.58■□□□□ 0.24
DDX1Q92499 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.58■□□□□ 0.24
DDX1Q92499 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.58■□□□□ 0.24
DDX1Q92499 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.58■□□□□ 0.24
DDX1Q92499 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.58■□□□□ 0.24
DDX1Q92499 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
DDX1Q92499 LINC00528-201ENST00000600723 2160 ntBASIC16.58■□□□□ 0.24
DDX1Q92499 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
DDX1Q92499 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
DDX1Q92499 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DDX1Q92499 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.57■□□□□ 0.24
DDX1Q92499 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
DDX1Q92499 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
DDX1Q92499 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.57■□□□□ 0.24
DDX1Q92499 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
DDX1Q92499 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.57■□□□□ 0.24
DDX1Q92499 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
DDX1Q92499 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.57■□□□□ 0.24
DDX1Q92499 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.57■□□□□ 0.24
DDX1Q92499 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DDX1Q92499 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms