Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 MSTO2P-201ENST00000314835 1709 ntBASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHKBP1Q8TBC3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 AC092933.1-201ENST00000393644 945 ntBASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 AC009486.1-201ENST00000569860 813 ntBASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.37■□□□□ 0.21
SHKBP1Q8TBC3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 FAM86MP-201ENST00000340703 885 ntBASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 BAATP1-201ENST00000412284 1225 ntBASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 AL355864.2-201ENST00000447420 863 ntBASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 AC093433.1-201ENST00000458048 571 ntBASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 AP001063.1-201ENST00000568332 529 ntBASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SHKBP1Q8TBC3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms