Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 AC084364.1-201ENST00000551967 1556 ntBASIC14.64□□□□□ -0.07
NUP43Q8NFH3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NUP43Q8NFH3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 RPL5P21-201ENST00000404620 815 ntBASIC14.63□□□□□ -0.07
NUP43Q8NFH3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 AC092580.3-201ENST00000430932 139 ntBASIC14.63□□□□□ -0.07
NUP43Q8NFH3 KRT18P64-201ENST00000434946 1219 ntBASIC14.63□□□□□ -0.07
NUP43Q8NFH3 SDHAP3-202ENST00000515467 728 ntBASIC14.63□□□□□ -0.07
NUP43Q8NFH3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 AC074044.1-201ENST00000609673 707 ntBASIC14.63□□□□□ -0.07
NUP43Q8NFH3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 AL109936.8-201ENST00000641772 604 ntBASIC14.63□□□□□ -0.07
NUP43Q8NFH3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 AC087499.5-201ENST00000452760 1342 ntBASIC14.63□□□□□ -0.07
NUP43Q8NFH3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NUP43Q8NFH3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 MIR943-201ENST00000401286 94 ntBASIC14.62□□□□□ -0.07
NUP43Q8NFH3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.62□□□□□ -0.07
NUP43Q8NFH3 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.62□□□□□ -0.07
NUP43Q8NFH3 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.62□□□□□ -0.07
NUP43Q8NFH3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 IGHV3-42-201ENST00000520410 361 ntBASIC14.62□□□□□ -0.07
NUP43Q8NFH3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 LINC01115-203ENST00000606068 577 ntBASIC14.62□□□□□ -0.07
NUP43Q8NFH3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms