Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.62□□□□□ -0.39
LINC00311Q8N616 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 AL589987.1-201ENST00000453380 819 ntBASIC12.62□□□□□ -0.39
LINC00311Q8N616 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 AC104794.3-201ENST00000566840 1248 ntBASIC12.62□□□□□ -0.39
LINC00311Q8N616 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 AC036164.1-201ENST00000570544 333 ntBASIC12.62□□□□□ -0.39
LINC00311Q8N616 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 NFIC-211ENST00000641145 8399 ntBASIC12.62□□□□□ -0.39
LINC00311Q8N616 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LINC00311Q8N616 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00311Q8N616 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.61□□□□□ -0.39
LINC00311Q8N616 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 INGX-202ENST00000489074 768 ntBASIC12.61□□□□□ -0.39
LINC00311Q8N616 GAPDHP40-201ENST00000505218 1006 ntBASIC12.61□□□□□ -0.39
LINC00311Q8N616 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 TPRX2P-201ENST00000535362 881 ntBASIC12.61□□□□□ -0.39
LINC00311Q8N616 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 AC009118.2-201ENST00000613275 655 ntBASIC12.61□□□□□ -0.39
LINC00311Q8N616 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LINC00311Q8N616 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00311Q8N616 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms