Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 WASH3P-207ENST00000560956 1394 ntBASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 FO538757.1-201ENST00000623083 1397 ntBASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 AC098831.1-202ENST00000438821 336 ntBASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 SLC25A1P1-201ENST00000528351 927 ntBASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM42Q8IWZ5 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 AC007686.3-201ENST00000619017 3487 ntBASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 AC004987.2-201ENST00000395959 1148 ntBASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 MIR4751-201ENST00000578027 74 ntBASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 AC005912.2-201ENST00000619492 2400 ntBASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM42Q8IWZ5 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 IGHV3-22-201ENST00000520721 359 ntBASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM42Q8IWZ5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms